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Job DescriptionP77376
Confidence100.00%DateThu Jan 5 12:28:19 GMT 2012
Rank5Aligned Residues328
% Identity49%Templatec3e82A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from2 klebsiella pneumoniae
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  NIRVGLIGYGYASKTFHAPLIAGTPGQELAVISSSDETKVKADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKA
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Template Sequence  TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLARL
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STTSTT
S

TTSS
T
TT
S
S
GGG
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   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  ALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVRDRW
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Template Sequence  ALNAGKHVVVDKPFTLDXQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTLGAVKHFESHFDRFRPE. . . . .
Template Known Secondary structure  TT

S
S
SSTT





TT
TTT
S
B


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   95....100.........110.........120.........130.........140.........150.........160.........
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  REQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIVHGS
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Template Sequence  . . . . . . VSGLWFDLGPHLIDQALQLFGLPQSVQGNIATLRDGAEINDWAHVVLNYPAHKVILHCSXLVAGGSSRFTVHGD
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S

STT

S


SS
SB

S


SS
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   170.........180.........190.........200.........210.........220.........230.........240...
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  RGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQA
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Template Sequence  KGSVIKARADQQESQLLAGVVPGSADWG. . . QDDDPLVIYDASLQAHAQATPQGDQRQYYXLIRDALKGQIANPVPPVEA
Template Known Secondary structure  S
S


T

TTSTTTT...


S
TTS






TTTSS

SS
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   255....260.........270.........280.. .......290.........300.........310.........320.........330.
 
   324.....330.........340.....
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Query Sequence  IQVMELIELGIESAKHRATLCL
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Template Conservation 
    
  
   
   
  
 
Template Sequence  LAVXAVLEAAVRSAESGXVQTL
Template Known Secondary structure  SS
B

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   332.......340.........350...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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