Job Description P77376 Confidence 98.94% Date Thu Jan 5 12:28:19 GMT 2012 Rank 82 Aligned Residues 145 % Identity 17% Template c3c8mA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase from thermoplasma2 volcanium Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.															40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																														.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	.	.	.	.	.	.	.	Q	E	L	A	V	I	S	S	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	K	V	K	A	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F
Query Conservation																														.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.											.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		X	K	T	I	N	L	S	I	F	G	L	G	N	V	G	L	N	.	L	L	R	I	I	R	S	F	N	E	E	N	R	L	G	L	K	F	N	V	V	F	V	A	D	S	L	H	S	Y	Y	N	E	R	I	D	I	G	K	V	I	S	Y	K	E	K	G	S	L	D	S	L	E	Y	E	S	I	S	A	S	E	A
Template Known Secondary structure													S						.													S	S	S											S	S						T	T												T	T		G	G	G			S
Template Predicted Secondary structure																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																							.
Query SS confidence																			.	.	.	.																																							.
Query Sequence		N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	.	.	.	.	F	P	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	.	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G
Query Conservation																			.	.	.	.																																							.
Alig confidence																			.	.	.	.																				.																			.
Template Conservation																																										.
Template Sequence		L	A	R	D	F	D	I	V	V	D	A	T	P	A	S	A	D	G	K	K	E	L	A	F	Y	K	E	T	F	E	N	G	K	D	V	V	T	A	N	K	.	S	G	L	A	N	F	W	P	E	I	X	E	Y	A	R	S	N	N	R	R	I	R	Y	E	A	T	V	A	G	G	V	P	L	F	S	F	I	D	Y
Template Known Secondary structure				S	S		S						S				S	S	S													T	T									.																		T						G	G	G	S	S	T	T	S
Template Predicted Secondary structure																																										.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	E	G	V	L	G	E	V	A	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	L	P	S	R	I	K	K	F	R	G	I
Template Known Secondary structure			S	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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