Job Description P77376 Confidence 100.00% Date Thu Jan 5 12:28:19 GMT 2012 Rank 35 Aligned Residues 305 % Identity 22% Template c3c1aB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (zp_00056571.1) from2 magnetospirillum magnetotacticum ms-1 at 1.85 a resolution Resolution 1.85 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	A	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	F	P	L	A	K
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		S	P	V	R	L	A	L	I	G	A	G	R	W	G	K	N	.	Y	I	R	T	I	A	G	L	P	G	A	A	L	V	R	L	A	S	S	N	P	D	N	L	A	L	V	P	P	G	C	V	I	E	S	D	W	R	S	V	V	S	A	P	E	V	E	A	V	I	I	A	T	P	P	A	T	H	A	E	I	T	L
Template Known Secondary structure												T	T	T	T		S	.							T		T	T									S						T	T			T	T					S							T		S	S								S		G	G	G
Template Predicted Secondary structure																		.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H	F	D	R	F	R	P	Q	V	R	D	R
Query Conservation
Alig confidence																																																									.	.																.	.	.	.	.	.	.	.
Template Conservation																																																									.	.																.	.	.	.	.	.	.	.
Template Sequence		A	A	I	A	S	G	K	A	V	L	V	E	K	P	L	T	L	D	L	A	E	A	E	A	V	A	A	A	A	K	A	T	G	V	X	V	W	V	E	H	T	Q	L	F	N	P	A	W	E	A	L	K	A	D	L	.	.	T	S	I	G	P	I	L	A	V	R	S	E	A	G	N	.	.	.	.	.	.	.	.
Template Known Secondary structure							T							S	S	S		S																								G	G	G	G										T	G	.	.	G	G	G		S											.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.																.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		W	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L	D	Q	A	I	T	L	F	G	.	L	P	V	S	M	T	V	D	L	A	Q	L	R	P	G	A	Q	S	T	D	Y	F	H	A	I	L	S	Y	P	Q	R	R	V	I	L	H	G	T	M	L	A	A	A	E	S	A	R	Y	I	V	H
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		H	G	P	Y	R	P	G	G	V	P	X	L	W	D	W	G	A	H	D	V	S	X	V	L	D	L	X	G	R	D	P	D	S	T	S	A	S	W	A	A	R	G	E	K	D	G	G	E	A	G	D	V	T	L	T	L	A	F	S	T	V	E	A	H	I	R	L	C	N	T	X	D	K	C	R	R	L	A	V	F
Template Known Secondary structure							T	T																					S	S			S													T	T													T	T									T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	R	G	S	Y	V	K	Y	G	L	D	P	Q	E	E	R	L	K	N	G	E	R	L	P	Q	E	D	W	G	Y	D	M	R	D	G	V	L	T	R	V	E	G	E	E	R	V	E	E	T	L	L	T	V	P	G	N	Y	P	A	Y	Y	A	A	I	R	D	A	L	N	G	D	G	E	N	P	V	P	A	S
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	A	G	T	L	V	X	D	D	R	A	T	D	K	L	T	L	H	P	P	Q	P	D	G	N	W	P	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	H	A	L	T	V	T	D	E	X	P	L	T	R	A	V	R	L	F	A	G	A	V	R	Q	P	E	P	G	P	S	P	L	E
Template Known Secondary structure			S	S							T	T	S	S	S	S								S	S						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								S	S	S					S	S	B
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.																.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		322	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	Q	V	M	E	L	I	E	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	R	V	V	R	V	L	G	A	C
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions