Job Description P77376 Confidence 94.25% Date Thu Jan 5 12:28:19 GMT 2012 Rank 461 Aligned Residues 122 % Identity 20% Template c2nloA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum Resolution 1.64 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.								.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.								.	.	.	.
Query Sequence		R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	A	.	.	.	.	.	.	.	D	W	P	T	V	T	V	.	.	.	.	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N
Query Conservation																																										.	.	.	.	.	.	.								.	.	.	.
Alig confidence															.									.																		.	.	.	.	.	.	.								.	.	.	.												.	.
Template Conservation															.									.																																															.	.
Template Sequence		S	V	V	Q	V	G	A	G	G	V	G	N	A	.	V	A	Y	A	L	V	T	H	.	G	V	Q	K	L	Q	V	A	D	L	D	T	S	R	A	Q	A	L	A	D	V	I	N	N	A	V	G	R	E	A	V	V	G	V	D	A	R	G	I	E	D	V	I	A	A	A	.	.	D	G	V	V	N	A	T	P	M
Template Known Secondary structure									S	T	T				.								T	.	T		S							S	S																T	S								S	T	T								S	.	.	S						S	S	T
Template Predicted Secondary structure															.									.																																															.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.
		75	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		D	T	H	.	.	.	F	P	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K
Query Conservation					.	.	.
Alig confidence					.	.	.																		.	.								.
Template Conservation																									.	.								.
Template Sequence		G	M	P	A	H	P	G	T	A	F	D	V	S	C	L	T	K	D	H	W	V	G	D	.	.	V	V	Y	M	P	I	E	.	T	E	L	L	K	A	A	R	A	L	G	C	E	T	L	D	G	T	R	M	A	I	H	Q	A	V	D	A	F	R
Template Known Secondary structure		T	S	T	T	S		S		S	S		G	G	G			T	T						.	.	S			S	S	S	S	.											T						T
Template Predicted Secondary structure																									.	.								.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions