Job Description P77376 Confidence 100.00% Date Thu Jan 5 12:28:19 GMT 2012 Rank 12 Aligned Residues 321 % Identity 21% Template c2glxD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:1,5-anhydro-d-fructose reductase; PDBTitle: crystal structure analysis of bacterial 1,5-af reductase Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	.	.	.	A	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	F	P	L	A	K
Query Conservation																																									.	.	.
Alig confidence															.																										.	.	.
Template Conservation															.
Template Sequence		R	W	G	L	I	G	A	S	T	I	A	R	E	.	W	V	I	G	A	I	R	A	T	G	G	E	V	V	S	M	M	S	T	S	A	E	R	G	A	A	Y	A	T	E	N	G	I	G	K	S	V	T	S	V	E	E	L	V	G	D	P	D	V	D	A	V	Y	V	S	T	T	N	E	L	H	R	E	Q	T	L
Template Known Secondary structure															.	T							T	T	T									S												T	T		S			B	S							T		T	T								S		G	G	G
Template Predicted Secondary structure															.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H	F	D	R	F	R	P	Q	V	R	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	I	R	A	G	K	H	V	L	C	E	K	P	L	A	M	T	L	E	D	A	R	E	M	V	V	A	A	R	E	A	G	V	V	L	G	T	N	H	H	L	R	N	A	A	A	H	R	A	M	R	D	A	I	A	E	G	R	I	G	R	P	I	A	A	R	V	F	H	A	V	Y	L	P	P	H	L	Q	G
Template Known Secondary structure						T	T							S	S			S	S														T	T									G	G	G	S												T	T	T	T	S	S											B			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		163		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																												.													.																				.
Query SS confidence			.																												.													.																				.
Query Sequence		W	.	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L	D	Q	A	I	T	L	F	G	.	L	P	V	S	M	T	V	D	L	A	Q	L	.	R	P	G	A	Q	S	T	D	Y	F	H	A	I	L	S	Y	P	Q	R	.	R	V	I	L	H	G	T	M	L	A	A	A	E	S	A	R	Y
Query Conservation			.																												.													.																				.
Alig confidence			.																												.													.																				.
Template Conservation
Template Sequence		W	R	L	E	R	P	E	A	G	G	G	V	I	L	D	I	T	V	H	D	A	D	T	L	R	F	V	L	N	D	D	P	A	E	A	V	A	I	S	H	S	A	G	M	G	K	E	G	V	E	D	G	V	M	G	V	L	R	F	Q	S	G	V	I	A	Q	F	H	D	A	F	T	T	K	F	A	E	T	G	F
Template Known Secondary structure		G	G	G	S		G	G	G	T		S					T												T	T														S	S	S		S	S			S									T	T	S									S	B		T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	H	G	S	R	G	S	Y	V	K	Y	G	L	D	P	Q	E	E	R	L	K	N	G	E	R	L	P	Q	E	D	W	G	Y	D	M	R	D	G	V	L	T	R	V	E	G	E	E	R	V	E	E	T	L	L	T	V	P	G	N	Y	P	A	Y	Y	A	A	I	R	D	A	L	N	G	D	G	E	N	P	V
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	H	G	T	E	G	S	L	I	G	R	N	V	M	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	P	V	G	T	V	T	L	R	N	A	E	G	E	S	Q	L	P	L	D	P	A	N	L	Y	E	T	A	L	A	A	F	H	S	A	I	E	G	H	G	Q	P	S	A
Template Known Secondary structure						S	S							S		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S								S	S	S																										T	S				S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.																				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	S	Q	A	I	Q	V	M	E	L	I	E	L	G	I	E	S	A	K	H	R	A	T	L	C	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	E	D	G	V	W	S	L	A	T	G	L	A	V	V	K	A	A	A	T	G	Q	A	A	E	I	E
Template Known Secondary structure		B																					S	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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