Job Description P77376 Confidence 93.98% Date Thu Jan 5 12:28:19 GMT 2012 Rank 469 Aligned Residues 117 % Identity 17% Template c2ev9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80
Predicted Secondary structure																																																	.																										.	.	.	.
Query SS confidence																																																	.																										.	.	.	.
Query Sequence		R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	A	D	W	P	T	V	T	V	.	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	.	.	.	.	F	P	L
Query Conservation																																																	.																										.	.	.	.
Alig confidence															.									.						.																			.								.	.	.																.	.	.	.
Template Conservation															.									.						.																											.	.	.
Template Sequence		P	A	L	V	L	G	A	G	G	A	G	R	A	.	V	A	F	A	L	R	E	A	.	G	L	E	V	W	.	V	W	N	R	T	P	Q	R	A	L	A	L	A	E	E	F	G	L	R	A	V	P	L	E	K	A	.	.	.	R	E	A	R	L	L	V	N	A	T	R	V	G	L	E	D	P	S	A	S	P	L
Template Known Secondary structure									S						.								T	.	T					.				S	S												T						G	G	G	G	.	.	.	G	G		S						S	S	T	T	T	T		T	T			S	S
Template Predicted Secondary structure															.									.						.																											.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.		.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		81	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		A	K	A	A	L	E	A	G	K	H	V	V	.	.	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K
Query Conservation														.	.
Alig confidence														.	.									.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		P	A	E	L	F	P	E	E	G	A	A	V	D	L	V	Y	R	P	L	W	T	R	.	.	.	.	.	.	F	L	R	E	A	K	A	K	G	L	K	V	Q	T	G	L	P	M	L	A	W	Q	G	A	L	A	F	R
Template Known Secondary structure			G	G	G			S	S						S			S	S	S	S			.	.	.	.	.	.								T	T						S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions