Job Description P77376 Confidence 99.41% Date Thu Jan 5 12:28:19 GMT 2012 Rank 73 Aligned Residues 101 % Identity 16% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		M	S	D	N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	A	D	W	P	T	V	T	V	V	.	.	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	F
Query Conservation																																																							.	.
Alig confidence																				.																																			.	.										.
Template Conservation																				.																																														.
Template Sequence		L	N	R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	.	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	G	.	R	I	E	I	A	L	L	T	V	P	R	E	A	A	Q
Template Known Secondary structure		T	T	S										S						.					S				S	S									S		T	T	T	T	T				T	T						G	G	G					S	T	T	.	T								S
Template Predicted Secondary structure																				.																																														.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		79	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		P	L	A	K	A	A	L	E	A	G	.	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		K	A	A	D	L	L	V	A	A	G	I	K	G	I	L	N	F	A	P	V	V	L	E	V	P	K
Template Known Secondary structure											T								S	S	S						T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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