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Job DescriptionP77376
Confidence100.00%DateThu Jan 5 12:28:19 GMT 2012
Rank37Aligned Residues304
% Identity16%Templatec1xeaD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of a gfo/idh/moca family oxidoreductase2 from vibrio cholerae
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.... .....50.........60.........70.........80
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Query Sequence  NIRVGLIGYGYASKTFHAPLIAGTPGQELAVISSSDETKVK. . . ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPL
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Template Sequence  SLKIAXIGLGDIAQKAYLPVLAQWPDIELV. LCTRNPKVLGTLATRYRVSATCTDYRDVLQYG. VDAVXIHAATDVHSTL
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TS
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SSGGGGGGG
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   2.......10.........20.........30. ........40.........50.........60... ......70.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  AKAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVR
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Template Sequence  AAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELAQQECGALRSLRWEKHR. . . . . .
Template Known Secondary structure  TTT

SSSSSSTTT


GGG


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   80.........90.........100.........110.........120.........130.........140.........150...
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV
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Template Sequence  . . . HALPGDIRTFVFDDFIHPLDSVNLSRQCNLDDLHLTYHXSEG. . LLARLDVQWQTGDTLLHASXNRQFGITTEHVTA
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B
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   154.....160.........170.........180.........190..... ....200.........210.........220........
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPA
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Template Sequence  SYDNVAYLFDSFTQGKXWRD. . . . . . . . . . . . . . . . . . . NQESRVALKDWTPXLASKGFDAXVQDWLQVAAAGKLPTHII
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SSSSSST...................T

TT

TTT


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   229230.........240........ .250.........260.........270.........280.........
 
   321........330.........
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Query Sequence  SQAIQVMELIELGIESAKH
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Template Sequence  ERNLASHQLAEAICQQITQ
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   290.........300........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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