Job Description P77376 Confidence 98.86% Date Thu Jan 5 12:28:19 GMT 2012 Rank 83 Aligned Residues 156 % Identity 13% Template c1r0lD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from2 zymomonas mobilis in complex with nadph Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.																										.	.	50	.	.	.	.
Predicted Secondary structure												.																	.								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																	.								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	I	R	V	G	L	I	G	Y	.	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	.	G	Q	E	L	A	V	I	.	S	S	S	D	E	T	K	V	K	A	D	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	V	T	V	V	S
Query Conservation												.																	.								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.							.										.								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		Q	P	R	T	V	T	V	L	G	A	T	G	S	I	G	H	S	.	T	L	D	L	I	E	R	N	L	D	R	Y	Q	V	I	A	L	T	A	N	R	N	V	K	D	L	A	D	A	A	K	R	T	N	A	K	R	A	V	I	A	D	P	S	L	Y	N	D	L	K	E	A	L	A	G	S	S	V	E	A	A	A
Template Known Secondary structure										T	T	T	S						.								T	T	T	T									S	S													T		S					S		G	G	G								T	T	T		S
Template Predicted Secondary structure																			.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		55	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		E	P	K	H	L	F	N	.	.	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	F	P	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T
Query Conservation									.	.
Alig confidence									.	.																																		.																										.	.	.	.	.
Template Conservation																																												.																										.	.	.	.	.
Template Sequence		G	A	D	A	L	V	E	A	A	M	M	G	A	D	W	T	M	A	A	I	I	G	C	A	G	L	K	A	T	L	A	A	I	R	K	G	K	T	V	A	L	A	.	N	K	E	S	L	V	S	A	G	G	L	M	I	D	A	V	R	E	H	G	T	T	L	L	P	.	.	.	.	.	V	D	S	E	H	N	A
Template Known Secondary structure		S									T	S			S								S	G	G	G										T	T	S						.		T																		T						.	.	.	.	.		S
Template Predicted Secondary structure																																												.																										.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H	F	D	R	F	R	P	Q	V	R	D	R	W	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	Q	C	F	P	H	H	N	R	D	Y	V	R	R	I	I	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	G	P	F	R	T	T	S	L	A	E	M
Template Known Secondary structure								T	T		G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.																		.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions