Job Description P77376 Confidence 95.80% Date Thu Jan 5 12:28:19 GMT 2012 Rank 400 Aligned Residues 121 % Identity 17% Template c1nytC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ Resolution 1.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence		R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	A	.	.	.	.	.	.	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	F	P
Query Conservation																																										.	.	.	.	.	.
Alig confidence															.									.				.														.	.	.	.	.	.													.	.
Template Conservation															.									.				.																																.	.
Template Sequence		R	I	L	L	I	G	A	G	G	A	S	R	G	.	V	L	L	P	L	L	S	L	.	D	C	A	.	V	T	I	T	N	R	T	V	S	R	A	E	E	L	A	K	L	F	A	H	T	G	S	I	Q	A	L	S	M	D	E	.	.	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D
Template Known Secondary structure									S						.								T	.	T			.						S	S											T	T	T	T	S							T	G	G	.	.	G	T	T				S						S	S		G	G	G	T
Template Predicted Secondary structure															.									.				.																																.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.		.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure		.	.																																						.
Query SS confidence		.	.																																						.
Query Sequence		.	.	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	.	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K
Query Conservation		.	.																																						.
Alig confidence		.	.																.	.								.													.
Template Conservation																			.	.								.
Template Sequence		I	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	.	.	M	F	Y	Q	K	G	K	.	T	P	F	L	A	W	C	E	Q	R	G	S	K	R	N	A	D	G	L	G	M	L	V	A	Q	A	A	H	A	F	L
Template Known Secondary structure							G	G	G			T	T						.	.	S				S	S		.										T	T							T
Template Predicted Secondary structure																			.	.								.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions