Job Description P77376 Confidence 93.08% Date Thu Jan 5 12:28:19 GMT 2012 Rank 493 Aligned Residues 120 % Identity 19% Template c1nvtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ Resolution 2.35 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50												.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	A	D	W	P	T	V	.	.	.	.	.	.	.	.	.	.	.	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.										.	.				.																	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation															.										.	.				.																																							.	.
Template Sequence		N	I	V	I	Y	G	A	G	G	A	A	R	A	.	V	A	F	E	L	A	K	D	N	.	.	N	I	I	.	I	A	N	R	T	V	E	K	A	E	A	L	A	K	E	I	A	E	K	L	N	K	K	F	G	E	E	V	K	F	S	G	L	D	V	D	L	D	.	.	G	V	D	I	I	I	N	A	T	P	I
Template Known Secondary structure									S						.						T	S	S	S	.	.				.				S	S																T												T	T				T	.	.	T								S		T
Template Predicted Secondary structure															.										.	.				.																																							.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.			.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.
		75	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		D	T	H	F	P	L	.	.	.	.	.	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.															.	.								.
Template Conservation																											.	.								.
Template Sequence		G	M	Y	P	N	I	D	V	E	P	I	V	K	A	E	K	L	R	E	D	M	V	V	M	D	.	.	L	I	Y	N	P	L	E	.	T	V	L	L	K	E	A	K	K	V	N	A	K	T	I	N	G	L	G	M	L	I	Y	Q	G	A	V	A	F	K
Template Known Secondary structure		T		T	T			S	S			S	S		S	T	T			S	S	S					.	.				S	S	S	S	.									T	T	T						T
Template Predicted Secondary structure																											.	.								.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions