Job Description P77376 Confidence 94.76% Date Thu Jan 5 12:28:19 GMT 2012 Rank 449 Aligned Residues 117 % Identity 16% Template c1npyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 Resolution 1.75 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																									.	.																																						.	.
Query SS confidence																																									.	.																																						.	.
Query Sequence		R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	.	.	A	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	F	P	L	A	.	.
Query Conservation																																									.	.																																						.	.
Alig confidence															.									.																	.	.												.	.	.	.																							.	.
Template Conservation															.									.																														.	.	.	.
Template Sequence		K	V	I	V	H	G	S	G	G	M	A	K	A	.	V	V	A	A	F	K	N	S	.	G	F	E	K	L	K	I	Y	A	R	N	V	K	T	G	Q	Y	L	A	A	L	Y	G	Y	A	Y	I	N	S	.	.	.	.	L	E	N	Q	Q	A	D	I	L	V	N	V	T	S	I	G	M	K	G	G	K	E	E	M
Template Known Secondary structure								S	S	T	T				.								T	.	T									S													T					S		.	.	.	.		T	T				S						S	S	T	T		T	T	S	T	T	T	T
Template Predicted Secondary structure															.									.																														.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
							82	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure		.	.	.	.	.												.	.
Query SS confidence		.	.	.	.	.												.	.
Query Sequence		.	.	.	.	.	K	A	A	L	E	A	G	K	H	V	V	.	.	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K
Query Conservation		.	.	.	.	.												.	.
Alig confidence		.	.	.	.	.												.	.									.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		D	L	A	F	P	K	A	F	I	D	N	A	S	V	A	F	D	V	V	A	M	P	V	E	T	P	.	.	.	.	.	.	F	I	R	Y	A	Q	A	R	G	K	Q	T	I	S	G	A	A	V	I	V	L	Q	A	V	E	Q	F	E
Template Known Secondary structure		S		S	S									S								S	S	S	S			.	.	.	.	.	.								T	T
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions