 |
Job Description | P77376 | Confidence | 97.47% | Date | Thu Jan 5 12:28:19 GMT 2012 |
Rank | 223 | Aligned Residues | 78 |
% Identity | 9% | Template | c1ks9A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; |
PDBTitle: ketopantoate reductase from escherichia coli
|
Resolution | 1.70 Å |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | V | G | L | I | G | Y | G | Y | A | S | K | T | F | H | A | P | L | I | A | G | T | P | G | Q | E | L | A | V | I | S | S | S | D | E | T | K | V | K | A | . |
. |
. |
. |
. |
. |
. |
. |
D | W | P | T | V | T | V | V | S | E | P | K | H | L | F | N | D | P | N | I | D | L | I | V | I | P | T | P | N | D | T |
Query Conservation |   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   |
|   |
|
|   |   | . |   |
|   |   |
|   |   |   | . |
|   |   |
|   | . |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |
|   |
|
|
|   |
|   |   |   |   |
Template Sequence |   |
M | K | I | T | V | L | G | C | G | A | L | G | Q | L | . |
W | L | T | A | L | C | K | Q | . |
G | H | E | V | Q | . |
G | W | L | R | V | P | Q | P | Y | C | S | V | N | L | V | E | T | D | G | S | I | F | N | E | S | L | T | A | N | D | P | D | F | L | A | T | S | . |
. |
D | L | L | L | V | T | L | K | A | W | Q |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |  |  |  |  |  | . |  |  |  |  |  |  |  | T | . | T |
|  |  |  | . |  |  |
| S | S |
|
| S |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  | S |
|  |  |  |  |  | T |
| . | . | S |  |  |  |  |
| S |
| G | G | G |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |
| . |
|
|  |  |  | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | |
. | . | . | . | . | 20 | . | . | |
. | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
. | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | F | P | L | A | K | A | A | L | E | A |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
V | S | D | A | V | K | S | L | A | S | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|