Job Description P77376 Confidence 100.00% Date Thu Jan 5 12:28:19 GMT 2012 Rank 7 Aligned Residues 330 % Identity 17% Template c1h6dL_ PDB info PDB header:protein translocation Chain: L: PDB Molecule:precursor form of glucose-fructose PDBTitle: oxidized precursor form of glucose-fructose oxidoreductase2 from zymomonas mobilis complexed with glycerol Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.
Query Sequence		M	S	D	N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	A	D	W	.	.	.	.	.	.	.	P	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P
Query Conservation																																																	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	R	R	F	G	Y	A	I	V	G	L	G	K	Y	A	L	N	Q	I	L	P	G	F	A	G	C	Q	H	S	R	I	E	A	L	V	S	G	N	A	E	K	A	K	I	V	A	A	E	Y	G	V	D	P	R	K	I	Y	D	Y	S	N	F	D	K	I	A	K	D	P	K	I	D	A	V	Y	I	I	L	P
Template Known Secondary structure														S						T					T	T	T		S	S									S												T	T			G	G	G				S	S	G	G	G	G	G	G	G		T	T								S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	T	H	F	P	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	L	H	A	E	F	A	I	R	A	F	K	A	G	K	H	V	M	C	E	K	P	M	A	T	S	V	A	D	C	Q	R	M	I	D	A	A	K	A	A	N	K	K	L	M	I	G	Y	R	C	H	Y	D	P	M	N	R	A	A	V	K	L	I	R	E	N	Q	L	G	K	L	G	M	V	T	T	D	N	S
Template Known Secondary structure		G	G	G											T	T							S	S			S	S															T								G	G	G	G													T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure								.	.	.																																.																	.	.	.
Query SS confidence								.	.	.																																.																	.	.	.
Query Sequence		R	F	R	P	Q	V	.	.	.	R	D	R	W	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L	D	Q	A	I	T	L	F	G	.	L	P	V	S	M	T	V	D	L	A	Q	L	R	P	G	A	.	.	.	Q	S	T	D	Y	F	H	A	I	L	S	Y	P	Q	R	R	V	I	L	H
Query Conservation								.	.	.																																.																	.	.	.
Alig confidence								.	.	.																																.																	.	.	.
Template Conservation
Template Sequence		D	V	M	D	Q	N	D	P	A	Q	Q	W	R	L	R	R	E	L	A	G	G	G	S	L	M	D	I	G	I	Y	G	L	N	G	T	R	Y	L	L	G	E	E	P	I	E	V	R	A	Y	T	Y	S	D	P	N	D	E	R	F	V	E	V	E	D	R	I	I	W	Q	M	R	F	R	S	G	A	L	S	H	G
Template Known Secondary structure						T	T	S					G	G	G						S	S	S					T													T	S													T	T		G	G	G	S	S	S		S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	M	L	A	A	A	E	S	A	R	Y	I	V	H	G	S	R	G	S	Y	V	K	Y	G	L	D	P	Q	E	E	R	L	K	N	G	E	R	L	P	Q	E	D	W	G	Y	D	M	R	D	G	V	L	T	R	V	E	G	E	E	R	V	E	E	T	L	L	T	V	P	G	N	Y	P	A	Y	Y	A	A	I
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	S	Y	S	T	T	T	T	S	R	F	S	V	Q	G	D	K	A	V	L	L	M	D	P	A	T	G	Y	Y	Q	N	L	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	T	P	G	H	A	N	Q	S	M	M	P	Q	F	I	M	P	A	N	N	Q	F	S	A	Q	L	D	H	L
Template Known Secondary structure					S	S	S											S	S						S	S	S	S		S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T									S	S			S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.																.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	A	L	N	G	D	G	E	N	P	V	P	A	S	Q	A	I	Q	V	M	E	L	I	E	L	G	I	E	S	A	K	H	R	A	T	L	C	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	A	V	I	N	N	K	P	V	R	S	P	G	E	E	G	M	Q	D	V	R	L	I	Q	A	I	Y	E	A	A	R	T	G	R	P	V	N	T
Template Known Secondary structure							T	T				S	S	B																					S	S
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions