Return to main results Retrieve Phyre Job Id

Job DescriptionP77376
Confidence97.47%DateThu Jan 5 12:28:19 GMT 2012
Rank222Aligned Residues88
% Identity19%Templatec1gpjA_
PDB info PDB header:reductaseChain: A: PDB Molecule:glutamyl-trna reductase; PDBTitle: glutamyl-trna reductase from methanopyrus kandleri
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.... .....50.. .......60.........70.....
Predicted Secondary structure 













...



.









.
Query SS confidence 











































. . .







.






















.
Query Sequence  MSDNIRVGLIGYGYASKTFHAPLIAGTPGQELAVISSSDETKVK. . . ADWPTVTV. VSEPKHLFNDPNIDLIVIPTPND.
Query Conservation 
   


 


 
      
   
       



 
       ...        .     


    

 
 
 

  .
Alig confidence 



.












.







.















...







.










..









.
Template Conservation 
  
. 






 

 
. 
  
   .
   
 
 


  

  

   
        
   
  
..






 
  
Template Sequence  LHDK. TVLVVGAGEMGKT. VAKSLVDR. GVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARS. . DVVVSATAAPH
Template Known Secondary structure 
TT
.S

..

S
SST


GGGT
..S

SSSS
Template Predicted Secondary structure 



.


.
.








..






Template SS confidence 















































































   165... .170.........180. ........ 190.........200.........210.........220........ .230.........
 
   76...80....... ..90...
Predicted Secondary structure  ..
...

Query SS confidence  . .











. . .





Query Sequence  . . THFPLAKAALEA. . . GKHVVV
Query Conservation  .. 
      

  ...

 

 
Alig confidence  ..











...





Template Conservation   

  
 
              
Template Sequence  PVIHVDDVREALRKRDRRSPILI
Template Known Secondary structure 

B

SS


Template Predicted Secondary structure 









Template SS confidence 






















   240.........250.........260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions