Job Description P69924 Confidence 97.33% Date Thu Jan 5 12:12:23 GMT 2012 Rank 27 Aligned Residues 206 % Identity 12% Template c3pw1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:phenylacetic acid degradation protein paaa; PDBTitle: the phenylacetyl-coa monooxygenase paaac subcomplex with phenylacetyl-2 coa Resolution 2.25 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	E	H	E	K	H	I	F	I	S	N	L	K	Y	Q	T	L	L	D	S	I	Q	G	R	S	P	N	V	A	L	L	P	L	I	S	I	P	E	L	E	T	W	V	E	T	W	A	F	S	E	T	I	H	S	R	S	Y	T	H	I	I	R	N	I	V	N	D	P	S	V	V	F	D	D	I	V	T	N	E
Query Conservation
Alig confidence																															.																																										.	.	.	.	.	.	.	.	.
Template Conservation																															.																																										.	.	.	.	.	.	.	.	.
Template Sequence		M	P	D	A	Y	R	K	T	L	I	R	Q	I	G	Q	H	A	H	S	E	I	V	G	M	L	P	E	G	N	.	W	I	T	R	A	P	T	L	R	R	K	A	I	L	L	A	K	V	Q	D	E	A	G	H	G	L	Y	L	Y	S	A	A	E	T	L	G	C	A	R	E	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																								T						T	.	T	G	G	G		S	S																											T	T	T						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	Q	K	R	A	E	G	I	S	S	Y	Y	D	E	L	I	E	M	T	S	Y	W	H	L	L	G	E	G	T	H	T	V	N	G	K	T	V	T	V	S	L	R	E	L	K	K	K	L	Y	L	C	L	M	S	V	N	A	L	E	A	I	R	F	Y	V	S	F	A	C	S	F	A	F	A	E	R	E	L	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	Q	K	M	L	D	G	R	M	K	Y	S	S	I	F	N	Y	P	T	L	S	W	A	D	I	G	V	I	G	W	L	V	D	G	.	.	.	.	A	A	I	V	N	Q	V	A	L	C	R	T	S	Y	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	S	S				G	G	G	G	S				S														.	.	.	.									G	G	G		S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
																												93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	N	A	K	I	I	R	L	I	A	R	D	E	A	L	H	L	T	G	T	Q	H	M	L	N	L	L	R	S	G	A	D	D	P	E	M	A	E	I	A	E	E	C	K	Q	E	C	Y	D	L	F	V	Q	A	A	Q	Q	E	K	D	W	A	D	Y	L	F	R	D	G	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence			.																																	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation			.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	.	Y	A	R	A	M	V	K	I	C	K	E	E	S	F	H	Q	R	Q	G	F	E	A	C	M	A	L	A	Q	G	S	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	Q	M	L	Q	D	A	I	N	R	F	W	W	P	A	L	M	M	F	G	P	N	D	D	N	S	P	N	S	A	R	S
Template Known Secondary structure			.																												T	S				.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T		S		T	T	S		T	T
Template Predicted Secondary structure			.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.														.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
					296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	M	I	G	L	N	K	D	I	L	C	Q	Y	V	E	Y	I	T	N	I	R	M	Q	A	V	G	L	D	L	P
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	T	W	K	I	K	R	F	T	N	D	E	L	R	Q	R	F	V	D	N	T	V	P	Q	V	E	M	L	G	M	T	V	P
Template Known Secondary structure				T	T	S		S	S																				T	T				S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions