Job Description P69924 Confidence 62.12% Date Thu Jan 5 12:12:23 GMT 2012 Rank 61 Aligned Residues 177 % Identity 12% Template c3oqlA_ PDB info PDB header:transcription Chain: A: PDB Molecule:tena homolog; PDBTitle: crystal structure of a tena homolog (pspto1738) from pseudomonas2 syringae pv. tomato str. dc3000 at 2.54 a resolution Resolution 2.54 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.
Query Sequence		I	S	N	L	K	Y	Q	T	L	L	D	S	I	Q	G	R	S	P	N	V	A	L	L	P	L	I	S	I	P	E	.	.	.	.	.	.	.	.	.	L	E	T	W	V	E	T	W	A	F	S	E	T	I	H	S	R	S	Y	T	H	I	I	R	N	I	V	N	D	P	S	V	V	F	D	D	I	V	T	N	E
Query Conservation																																.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																																										.
Template Sequence		P	Q	I	X	R	Q	Y	L	I	G	G	W	P	V	V	E	Q	F	A	V	Y	X	A	K	N	L	T	K	T	R	F	G	R	H	P	G	E	D	X	A	R	R	W	L	X	R	N	I	R	V	E	L	N	H	A	D	Y	W	V	N	W	C	A	A	H	D	V	T	L	E	D	L	.	H	D	Q	R	V	A	P
Template Known Secondary structure																												T	T			T	T	S																		T	T	T											T	T	T							.			T		S		G
Template Predicted Secondary structure																																																																										.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																										.										.	.
Query SS confidence																																																										.										.	.
Query Sequence		Q	I	Q	K	R	A	E	G	I	S	S	Y	Y	D	E	L	I	E	M	T	S	Y	W	H	L	L	G	E	G	T	H	T	V	N	G	K	T	V	T	V	S	L	R	E	L	K	K	K	L	Y	L	C	L	M	S	V	.	N	A	L	E	A	I	R	F	Y	.	.	V	S	F	A	C	S	F	A	F	A	E	R
Query Conservation																																																										.										.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	H	A	L	S	H	W	C	W	Q	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	D	S	L	A	V	A	X	A	A	T	N	Y	A	I	E	G	A	T	G	E	W	S	A	V	V	C	S	T	G	V	Y	A	E	A
Template Known Secondary structure		G	G	G											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S									T	T	T															S	S	S					T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.																																.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		E	L	M	E	G	N	A	K	I	I	R	L	I	.	.	.	.	A	R	D	E	A	L	H	L	T	G	T	Q	H	M	L	N	L	L	R	S	G	A	D	D	P	E	M	A	E	I	A	E	E	C	K	Q	E	C	Y	D	L	F	V	Q	A	A	Q	Q	E	K	D	W	A	D	Y	L	F
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.					.	.																		.	.	.	.	.	.	.
Template Conservation																							.	.																		.	.	.	.	.	.	.
Template Sequence		F	A	E	E	T	R	K	K	S	X	K	W	L	K	X	H	A	Q	Y	D	A	.	.	H	P	W	E	A	L	E	I	I	C	T	L	V	G	N	K	P	.	.	.	.	.	.	.	S	L	Q	L	Q	A	E	L	R	Q	A	V	T	K	S	Y	D	Y	X	Y	L	F	L	E	R	C	I
Template Known Secondary structure		S																	T				.	.															S	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.																		.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.								.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions