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Job DescriptionP69924
Confidence100.00%DateThu Jan 5 12:12:23 GMT 2012
Rank13Aligned Residues283
% Identity24%Templatec3hf1B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 PDBTitle: crystal structure of human p53r2
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
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Query Sequence  KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV
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Template Sequence  EEPLLRKSSRRFV. IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVE
Template Known Secondary structure 

TTT
TTS

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S
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TT


GGGS

TTS
TTTTTTTTT
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   31........40... ......50.........60.........70.........80.........90.........100.........
 
   95....100.........110.........120.........130.........140.... .....150.........160.........170...
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Query Sequence  ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTN. EQIQKRAEGISSYYDELIEMTSYWHLLGE
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Template Sequence  RFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIMPYVKKKADWALRWI. . . . . . . . . . . . . . .
Template Known Secondary structure  T


S
STTGGG


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   110.........120.........130.........140.........150.........160.........170....
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  GTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL
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Template Sequence  . . . . . . . . . . . . . . ADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYL
Template Known Secondary structure  ..............SSSSS
TTTTT


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   177..180.........190.........200.........210.........220.........230.........240..
 
   254.....260.........270.........280.........290.........300.........310.........320.........330...
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Query Sequence  RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPI
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Template Sequence  VNKPSE. . . . . . . . . . . ERVREIIVDAVKIEQEFLTEALPV. GLIGMNCILMKQYIEFVADRLLVELGFSKVFQA. ENPF
Template Known Secondary structure  SS


T...........TTTTS
G.GGGT

TT


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   243..... .250.........260.........270.. .......280.........290.........300..... ....
 
   334.....340
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Query Sequence  PWINTWL
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Template Sequence  DFMENIS
Template Known Secondary structure  GGG

S
Template Predicted Secondary structure 
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   310......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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