Job Description P69924 Confidence 100.00% Date Thu Jan 5 12:12:23 GMT 2012 Rank 5 Aligned Residues 303 % Identity 24% Template c2rccC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:ribonucleoside-diphosphate reductase subunit beta; PDBTitle: crystal structure of putative class i ribonucleotide reductase2 (np_241368.1) from bacillus halodurans at 1.90 a resolution Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	T	F	S	Q	T	K	N	D	Q	L	K	E	P	M	F	F	G	Q	P	V	N	V	A	R	Y	D	Q	Q	K	Y	D	I	F	E	K	L	I	E	K	Q	L	S	F	F	W	R	P	E	E	V	D	V	S	R	D	R	I	D	Y	Q	A	L	P	E	H	E	K	H	I	F	I	S	N	L	K	Y	Q	T
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		R	K	I	Y	D	T	T	A	S	N	.	A	S	T	G	I	L	N	G	K	S	S	N	V	L	N	W	D	D	V	R	F	S	W	A	Y	P	L	Y	K	N	X	L	A	N	F	W	T	P	F	E	I	N	X	S	H	D	A	K	Q	F	P	T	L	T	E	T	E	Q	E	A	F	K	K	I	I	G	L	L	A
Template Known Secondary structure				S			T	T	S		S	.	S		S		S	S	S					S				T	T	S		S		T	T											T				G	G	G	S									G	G	G	S
Template Predicted Secondary structure												.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		L	L	D	S	I	Q	G	R	S	P	N	V	A	L	L	P	L	I	S	I	P	E	L	E	T	W	V	E	T	W	A	F	S	E	T	I	H	S	R	S	Y	T	H	I	I	R	N	I	V	N	D	P	S	.	.	V	V	F	D	D	I	V	T	N	E	Q	I	Q	K	R	A	E	G	I	S	S	Y	Y	D	E
Query Conservation																																																							.	.
Alig confidence												.																																											.	.
Template Conservation												.
Template Sequence		F	L	D	S	V	Q	T	D	Y	S	.	X	R	A	A	E	Y	L	T	D	S	S	L	A	A	L	X	S	V	L	S	F	Q	E	V	V	H	N	Q	S	Y	S	Y	V	L	S	S	L	V	P	K	A	T	Q	D	E	I	F	E	Y	W	K	H	D	D	V	L	K	E	R	N	E	F	I	I	D	G	Y	E	K
Template Known Secondary structure												.			S	S	S	S																																S									T	T
Template Predicted Secondary structure												.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	E	M	T	S	Y	W	H	L	L	G	E	G	T	H	T	V	N	G	K	T	V	T	V	S	L	R	E	L	K	K	K	L	Y	L	C	L	M	S	V	N	A	L	E	A	I	R	F	Y	V	S	F	A	C	S	F	A	F	A	E	R	E	L	M	E	G	N	A	K	I	I	R	L	I	A	R	D	E	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	T	P	K	T	F	L	E	S	I	V	Y	D	V	I	L	E	G	L	N	F	Y	S	G	F	A	F	F	Y	N	L	A	R	N	Q	K	X	V	S	T	S	T	X	I	N	Y	I	N	R	D	E	Q
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																			T														T	T	T	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.																									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	L	T	G	T	Q	H	M	L	N	L	L	R	S	G	A	D	D	P	E	M	A	E	I	A	E	E	C	K	Q	E	C	Y	D	L	F	V	Q	A	A	Q	Q	E	K	D	W	A	D	Y	L	F	R	D	G	S	M	I	G	L	N	K	D	I	L	C	Q	Y	V	E	Y	I	T	N	I	R	M	Q	A	V
Query Conservation
Alig confidence																						.	.	.	.																															.
Template Conservation																						.	.	.	.																															.
Template Sequence		L	H	V	Y	L	F	T	N	I	F	K	E	L	L	V	E	F	P	E	L	.	.	.	.	N	T	E	E	T	K	T	F	V	K	T	T	L	X	K	A	A	D	L	E	K	D	W	F	R	Y	I	I	G	D	.	K	I	P	G	I	N	P	E	D	X	E	T	Y	I	S	F	I	A	N	K	R	A	V	Q	L
Template Known Secondary structure																			G	G	G	.	.	.	.		S																										T	T	T	.		S	T	T																					T
Template Predicted Secondary structure																						.	.	.	.																															.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		321	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	L	D	L	P	F	Q	T	.	R	S	N	P	I	P	W	I
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		G	X	E	K	P	Y	P	E	I	K	H	N	P	X	K	W	I
Template Known Secondary structure		T				S		T	T			S		T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions