Job Description P69924 Confidence 100.00% Date Thu Jan 5 12:12:23 GMT 2012 Rank 1 Aligned Residues 340 % Identity 100% Template c1yfdA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase 1 beta PDBTitle: crystal structure of the y122h mutant of ribonucleotide2 reductase r2 protein from e. coli Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	T	T	F	S	Q	T	K	N	D	Q	L	K	E	P	M	F	F	G	Q	P	V	N	V	A	R	Y	D	Q	Q	K	Y	D	I	F	E	K	L	I	E	K	Q	L	S	F	F	W	R	P	E	E	V	D	V	S	R	D	R	I	D	Y	Q	A	L	P	E	H	E	K	H	I	F	I	S	N	L	K	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	T	T	F	S	Q	T	K	N	D	Q	L	K	E	P	M	F	F	G	Q	P	V	N	V	A	R	Y	D	Q	Q	K	Y	D	I	F	E	K	L	I	E	K	Q	L	S	F	F	W	R	P	E	E	V	D	V	S	R	D	R	I	D	Y	Q	A	L	P	E	H	E	K	H	I	F	I	S	N	L	K	Y	Q
Template Known Secondary structure					S	S			S				G	G	G	S		S	B	S	S	S				S				S			S														T				G	G	G	S			T	T								S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	D	S	I	Q	G	R	S	P	N	V	A	L	L	P	L	I	S	I	P	E	L	E	T	W	V	E	T	W	A	F	S	E	T	I	H	S	R	S	Y	T	H	I	I	R	N	I	V	N	D	P	S	V	V	F	D	D	I	V	T	N	E	Q	I	Q	K	R	A	E	G	I	S	S	Y	Y	D	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	L	D	S	I	Q	G	R	S	P	N	V	A	L	L	P	L	I	S	I	P	E	L	E	T	W	V	E	T	W	A	F	S	E	T	I	H	S	R	S	H	T	H	I	I	R	N	I	V	N	D	P	S	V	V	F	D	D	I	V	T	N	E	Q	I	Q	K	R	A	E	G	I	S	S	Y	Y	D	E	L
Template Known Secondary structure																T	G	G	G	B		S																											T	T		S																				T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	M	T	S	Y	W	H	L	L	G	E	G	T	H	T	V	N	G	K	T	V	T	V	S	L	R	E	L	K	K	K	L	Y	L	C	L	M	S	V	N	A	L	E	A	I	R	F	Y	V	S	F	A	C	S	F	A	F	A	E	R	E	L	M	E	G	N	A	K	I	I	R	L	I	A	R	D	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	M	T	S	Y	W	H	L	L	G	E	G	T	H	T	V	N	G	K	T	V	T	V	S	L	R	E	L	K	K	K	L	Y	L	C	L	M	S	V	N	A	L	E	A	I	R	F	Y	V	S	F	A	C	S	F	A	F	A	E	R	E	L	M	E	G	N	A	K	I	I	R	L	I	A	R	D	E	A	L
Template Known Secondary structure													S						T	T																											T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	T	G	T	Q	H	M	L	N	L	L	R	S	G	A	D	D	P	E	M	A	E	I	A	E	E	C	K	Q	E	C	Y	D	L	F	V	Q	A	A	Q	Q	E	K	D	W	A	D	Y	L	F	R	D	G	S	M	I	G	L	N	K	D	I	L	C	Q	Y	V	E	Y	I	T	N	I	R	M	Q	A	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	T	G	T	Q	H	M	L	N	L	L	R	S	G	A	D	D	P	E	M	A	E	I	A	E	E	C	K	Q	E	C	Y	D	L	F	V	Q	A	A	Q	Q	E	K	D	W	A	D	Y	L	F	R	D	G	S	M	I	G	L	N	K	D	I	L	C	Q	Y	V	E	Y	I	T	N	I	R	M	Q	A	V	G
Template Known Secondary structure															T	T	S	S											T																							T	T	T			B	T	T	B	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	P	F	Q	T	R	S	N	P	I	P	W	I	N	T	W	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	L	P	F	Q	T	R	S	N	P	I	P	W	I	N	T	W	L	V
Template Known Secondary structure						S						S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions