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Job DescriptionP0AGM7
Confidence100.00%DateThu Jan 5 11:29:32 GMT 2012
Rank1Aligned Residues405
% Identity100%Templatec3qe7A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:uracil permease; PDBTitle: crystal structure of uracil transporter--uraa
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLL
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Template Sequence  RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLL
Template Known Secondary structure 

B
TT



TTTS
TTT





GGGG
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  PLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISI
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Template Sequence  PLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISI
Template Known Secondary structure  GG
TT
S

TSS
BTTB


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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  TTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAALVVIAEHV
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Template Sequence  TTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAALVVIAEHV
Template Known Secondary structure  SSSTTTTTTTSSS
SS










T
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  GHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLA
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Template Sequence  GHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLA
Template Known Secondary structure  TS
T




T



TB

T

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   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  AAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLS
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Template Sequence  AAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLS
Template Known Secondary structure  TTS
TTS
TTS




SSS



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   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   404....
Predicted Secondary structure 
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Query Sequence  LIFKL
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Template Conservation 

   
Template Sequence  LIFKL
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   404....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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