 |
Job Description | P37057 | Confidence | 59.16% | Date | Thu Jan 5 11:54:46 GMT 2012 |
Rank | 29 | Aligned Residues | 25 |
% Identity | 28% | Template | c2owoA_ |
PDB info |
PDB header:ligase/dna | Chain: A: PDB Molecule:dna ligase; |
PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate
|
Resolution | 2.30 Å |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
. | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Query Sequence |   |
H | C | P | L | C | Q | H | A | A | H | A | R | T | S | R | Y | I | T | D | T | T | K | E | R | Y | H | Q | C | Q | N | V | . |
N | C |
Query Conservation |   |
  |
|
|   |
|
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |
|   | . |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |
|
|   |
|   |
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |   |   |
|
Template Sequence |   |
H | C | P | V | C | G | S | D | V | E | R | V | E | G | . |
. |
. |
. |
. |
. |
. |
. |
E | A | V | A | R | C | T | G | G | L | I | C |
Template Known Secondary structure |   |
B |
| T | T | T |
|
| B |  |  |  |
| T | T | . | . | . | . | . | . | . | . |
| S |
|  |  |  |
|
| G | G | G |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
407 | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 430 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|