|   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | I | V | P | T | P | I | G | N | L | A | D | I | T | Q | R | A | L | E | V | L | Q | A | V | D | L | I | A | A | E | D | T | R | H | T | G | L | L | L | Q | H | F | G | I | N | A | R | L | F | A | L | H | D | H | N | E | Q | Q | K | A | E | T | L | L | A | K | L | Q | E | G | Q | N | I | A | L | V | S | D | A |
Query Conservation |   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |
|
|
|
|   |   |
|
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
|
|
|
|
|   |
|
|
|   |   | . |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |   | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   | . |   |
Template Sequence |   |
I | W | I | V | G | S | G | T | C | R | G | . |
Q | T | T | E | R | A | K | E | I | I | E | R | A | E | V | I | Y | G | . |
. |
. |
. |
. |
S | R | R | A | L | E | L | A | G | V | V | D | D | S | R | A | R | I | L | R | S | F | K | G | D | E | I | R | R | I | X | E | E | G | R | E | R | E | V | A | V | I | S | . |
T |
Template Known Secondary structure |   |
 |  |  |  |  |
| B | S | S | T | T | . |
|
|
|  |  |  |  |  |  |  |  |  |
| S |  |  |  |  | . | . | . | . | . |
|  |  |  |  |  |  | T | T |
| T | T |
| T | T |  |  |  |
| S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  | . | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | |
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
. |
  |
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | P | L | I | N | D | P | G | Y | H | L | V | R | T | C | R | E | A | G | I | R | V | V | P | L | P | G | P | C | A | A | I | T | A | L | S | A | A | G | L | P | S | D | R | F | C | Y | E | G | F | L | P | A | K | S | K | G | R | R | D | A | L | K | A | I | E | A | E | P | R | T | L | I | F | Y | E | S | T | H |
Query Conservation |   |
|
|
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|
|   |   |
|
|   |
|   |
|
|   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |   | . | . |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
Template Sequence |   |
G | D | P | X | V | A | G | L | G | R | V | L | R | E | I | A | . |
. |
E | D | V | E | I | K | I | E | P | A | I | S | S | V | Q | V | A | L | A | R | L | K | V | D | L | S | E | V | A | V | V | D | C | F | D | . |
. |
. |
. |
. |
. |
. |
A | E | L | T | E | L | L | K | Y | R | H | L | L | I | L | A | D | S | H | F |
Template Known Secondary structure |   |
B |
| T | T | T | T | T | S |  |  |  |  |  | T | S |
| . | . |
| S | S |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |  |  |  |  | T |  |  |  |  |
|  |  |  |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | L | D | S | L | E | D | I | V | A | V | L | G | E | S | R | Y | V | V | L | A | R | E | L | T | K | T | W | E | T | I | H | G | A | P | V | G | E | L | L | A | W | V | K | E | D | E | N | R | R | K | G | E | M | V | L | I | V | E | G | H | K |
Query Conservation |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |   |
|   |
|   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
Template Sequence |   |
P | L | E | R | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | K | R | R | V | V | L | L | E | N | L | C | X | E | G | E | R | I | R | E | G | N | A | D | S | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | L | E | S | D | Y | T | I | I | F | V | E | R | E |
Template Known Secondary structure |   |
|
| G | G | G | . | . | . | . | . | . | . | . | . | T | T |
|  |  |  |  |  |  | S | T | T | S | T | T |
|  |  |  |  |  |  | T | T | T |
| . | . | . | . | . | . | . | . | . |
|
|
|
| S | S |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
150 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |