Job Description P67087 Confidence 29.66% Date Thu Jan 5 12:10:24 GMT 2012 Rank 49 Aligned Residues 87 % Identity 14% Template c3mvnA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp Resolution 1.90 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	G	Q	L	Y	I	V	P	T	P	I	G	N	L	A	D	I	T	Q	R	A	L	E	V	L	Q	A	V	D	L	I	A	A	E	D	T	R	H	T	G	L	L	L	Q	H	F	G	I	N	A	R	L	F	A	L	H	D	H	N	E	Q	Q	K	A	E	T	L	L	A	K	L	Q	E	G	Q	N	I	A	L
Query Conservation
Alig confidence										.	.	.	.	.	.																																											.	.	.	.																.
Template Conservation										.	.	.	.	.	.																																											.	.	.	.																.
Template Sequence		G	Q	Q	R	I	L	A	V	.	.	.	.	.	.	L	E	P	R	K	H	E	L	A	T	S	L	Q	D	A	D	S	V	F	I	Y	Q	P	W	Q	V	S	E	V	L	A	N	L	A	Q	P	A	I	S	A	D	D	.	.	.	.	V	D	E	L	V	X	R	I	V	Q	Q	A	K	P	N	.	D	H	I	L
Template Known Secondary structure		T	T	S						.	.	.	.	.	.													T	T		S															T	T			S						S	S	.	.	.	.														T	T	.
Template Predicted Secondary structure										.	.	.	.	.	.																																											.	.	.	.																.
Template SS confidence
		352	.	.	.	.	.	.	.							360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.					.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	D	A	G	T	P	L	I	N	D	P	G	Y	H	L	V	R	T	C
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		I	X	S	N	G	A	.	.	F	G	G	I	H	Q	K	L	L	T	A	L
Template Known Secondary structure					S	S		.	.	G	G	G									T
Template Predicted Secondary structure								.	.
Template SS confidence
		434	.	.	.	.	.			440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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