Return to main results Retrieve Phyre Job Id

Job DescriptionP67087
Confidence51.67%DateThu Jan 5 12:10:24 GMT 2012
Rank30Aligned Residues113
% Identity12%Templatec2z1dA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:hydrogenase expression/formation protein hypd; PDBTitle: crystal structure of [nife] hydrogenase maturation protein, hypd from2 thermococcus kodakaraensis
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.... .....90.........100.........110.........120.........130.........140......
Predicted Secondary structure 

....























Query SS confidence 













. . . .





























































Query Sequence  QQKAETLLAKLQEG. . . . QNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLP
Query Conservation        
      
....  

 






 
 
 
  

      

 
 






  

 
 

     
 
 



Alig confidence 













....







.




















































Template Conservation     

 

 

         


 

.








  

  


 
 







 


 

   
 




 





Template Sequence  VEDIVAMQLIMRKAREEGEEIILTTF. GDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFET
Template Known Secondary structure  TT


.TTGGG


TT

TT

SS
TTS
Template Predicted Secondary structure 






.






















Template SS confidence 















































































   73......80.........90........ .100.........110.........120.........130.........140.........150.
 
   147..150.........160.........170.........180....
Predicted Secondary structure 












Query SS confidence 





































Query Sequence  AKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLEDIVA
Query Conservation       
   
  
     
 
  


 

   
  
  
Alig confidence 





































Template Conservation 


  
  
  
      




   

 


   

 
Template Sequence  TTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLK
Template Known Secondary structure  T
SS
Template Predicted Secondary structure 









Template SS confidence 





































   152.......160.........170.........180.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions