Job Description P0AFX0 Confidence 5.95% Date Thu Jan 5 11:27:28 GMT 2012 Rank 41 Aligned Residues 78 % Identity 18% Template c3e5nA_ PDB info PDB header:ligase Chain: A: PDB Molecule:d-alanine-d-alanine ligase a; PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331 Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																							.	.																														.	.	.	.	.	.
Query SS confidence																							.	.																														.	.	.	.	.	.
Query Sequence		E	I	T	E	A	L	R	E	F	V	T	A	K	F	A	K	L	E	Q	Y	F	.	.	D	R	I	N	Q	V	Y	V	V	L	K	V	E	K	V	T	H	T	S	D	A	T	L	H	V	N	G	G	E	.	.	.	.	.	.	I	H	A	S	A	E	G	Q	D	M	Y	A	A	I	D	G	L	I	D	K	L	A
Query Conservation																							.	.																														.	.	.	.	.	.
Alig confidence																							.	.																									.					.	.	.	.	.	.																		.	.	.
Template Conservation																																																	.																												.	.	.
Template Sequence		D	I	D	A	Q	T	Q	Q	R	I	Q	Q	I	A	V	Q	A	Y	Q	A	L	G	C	A	G	M	A	R	V	D	V	F	L	C	A	D	G	R	I	V	I	N	E	V	N	T	L	.	P	G	F	T	R	I	S	V	Y	P	K	L	W	Q	A	S	G	L	D	Y	R	G	L	I	T	R	L	.	.	.	I	E
Template Known Secondary structure		S	S																				T			S										T	T										S	S	.				S	T	T									T	T	T											.	.	.
Template Predicted Secondary structure																																																	.																												.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.
		83	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	T	K	H	K	D	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	L	E	R	H	T	D	D	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions