Job Description P75835 Confidence 36.04% Date Thu Jan 5 12:14:49 GMT 2012 Rank 12 Aligned Residues 131 % Identity 8% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	T	P	V	N	G	Y	F	L	T	L	V	L	V	A	I	L	I	M	L	P	T	L	G	I	G	D	M	N	N	L	Y	K	W	L	L	N	L	N	S	V	V	M	P	L	R	Y	L	W	V	F	V	A	F	I	A	V	V	R	L	A	Q	K	Y	K	P	E	Y	V	F	I	R	N	K	P	L	A	M	T
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.
Template Sequence		H	T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	.	.	.	.	.	.	.	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I
Template Known Secondary structure				S																						T	T											T																		.	.	.	.	.	.	.		S	S	T	T						T	T		S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.							.	.	.	440	.	.	.	.	.	.	.	.	.	450									.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		V	G	I	W	C	F	A	F	T	A	F	A	C	L	T	G	I	F	P	.	.	.	.	.	.	K	M	E	A	F	T	A	E	W	T	F	Q	L	A	.	.	.	.	.	.	.	.	L	N	V	A	T	P	F	V	L	V	G	L	G	L	I	F	P	L	L	A	R	K	A	N	S
Query Conservation																					.	.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F	H	V	G	R	E	E	R	A	G	E
Template Known Secondary structure																			T	T	S																				T	T	T	S																												S	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions