Job Description P75835 Confidence 3.29% Date Thu Jan 5 12:14:49 GMT 2012 Rank 41 Aligned Residues 218 % Identity 8% Template c2w2eA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin; PDBTitle: 1.15 angstrom crystal structure of p.pastoris aquaporin,2 aqy1, in a closed conformation at ph 3.5 Resolution 1.15 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	R	W	Y	N	I	A	L	M	S	F	I	T	V	W	G	.	F	G	N	V	V	N	N	Y	A	N	Q	G	L	V	V	V	F	S	W	V	F	I	F	A	L	Y	F	T	P	Y	A	L	I	V	G	Q	L	G	S	T	F	K	D	G	K	G	G	V	S	T	W	I	K	H	T	M	G	P	G	L	A	Y	L
Query Conservation																		.
Alig confidence																		.																																												.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		V	G	T	F	L	F	L	W	S	A	F	V	I	A	Q	I	A	N	Q	A	P	E	T	P	D	G	G	S	N	P	A	Q	L	I	M	I	S	F	G	F	G	F	G	V	M	V	G	V	F	I	T	Y	R	V	S	G	G	N	L	N	.	.	.	.	P	A	V	T	L	A	L	V	L	A	R	A	I	P	P	F
Template Known Secondary structure																			T	T	S				G	G	G																										T	T	T	T					S	.	.	.	.										T	T	S	S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		A	A	W	T	Y	W	V	V	H	I	P	Y	L	A	Q	K	P	Q	A	I	L	I	A	L	G	W	A	M	K	G	D	G	S	L	I	K	E	Y	S	V	V	A	L	Q	G	L	T	L	V	L	F	I	F	F	M	W	V	A	S	R	G	M	K	S	.	.	L	K	I	V	G	S	V	A	G	I	A	M	F	V
Query Conservation																																																																		.	.
Alig confidence																																																																		.	.
Template Conservation
Template Sequence		R	G	I	L	M	A	F	T	Q	I	V	A	G	M	A	A	A	G	A	A	S	A	M	T	P	G	E	I	A	F	A	N	A	L	G	G	G	A	S	R	T	R	G	L	F	L	E	A	F	G	T	A	I	L	C	L	T	V	L	M	L	A	V	E	K	H	R	A	T	W	F	A	P	F	V	I	G	I	A	L
Template Known Secondary structure																									S		S	S				S					T	T																									T	T	S		S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	L	L	Y	V	A	M	A	V	T	A	P	A	I	T	E	V	H	I	A	T	T	N	I	T	W	E	T	F	I	P	H	I	D	F	T	Y	I	T	T	I	S	M	L	V	F	A	V	G	G	A	E	K	I	S	P	Y	V	N	Q	T	R	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	A	H	L	I	C	I	Y	Y	T	G	A	G	L	N	P	A	R	S	F	G	P	A	V	A	A	R	S	F	P	N	Y	H	W	I	Y	W	L	G	P	I	L	G	A	F	L	A	Y	S	I	W	Q	M	W	K	W	L	N	Y	Q	T	T	N	P
Template Known Secondary structure																	S												T				T	T	T	T																							T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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