Job Description P45541 Confidence 59.30% Date Thu Jan 5 12:03:00 GMT 2012 Rank 259 Aligned Residues 151 % Identity 12% Template d2dfaa1 SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase LamB/YcsF-like Resolution 1.90

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																								.	.	.	.	.	.	.	.																																				.
Query SS confidence																								.	.	.	.	.	.	.	.																																				.
Query Sequence		D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	.	.	.	.	.	.	.	.	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	.	L	E	P	L	T	P	Y	E	S	N	V	V	C	N
Query Conservation																								.	.	.	.	.	.	.	.																																				.
Alig confidence																		.						.	.	.	.	.	.	.	.																																				.
Template Conservation																		.
Template Sequence		G	R	I	L	E	A	V	R	L	A	K	A	H	G	V	A	.	V	G	A	H	P	G	F	P	D	L	V	G	F	G	R	R	E	M	A	L	S	P	E	E	V	Y	A	D	V	L	Y	Q	I	G	A	L	S	A	F	L	K	A	E	G	L	P	L	H	H	V	K	P	H	G	A	L	Y	L	K	A	C	R	D
Template Known Secondary structure														T	T			.								S		T	T	T	T	T		S																											T	T						B
Template Predicted Secondary structure																		.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.			.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.				.	.
Query SS confidence																																																																	.	.				.	.
Query Sequence		A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M	S	Y	F	D	K	L	G	D	K	L	R	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	.	.	G	K	M	.	.	P	L	R	E	L	M	R	D	I	I
Query Conservation																																																																	.	.				.	.
Alig confidence													.	.	.	.																																																	.	.				.	.
Template Conservation													.	.	.	.
Template Sequence		R	E	T	A	R	A	I	A	L	A	V	.	.	.	.	K	A	F	D	P	G	L	P	L	V	V	L	P	G	T	V	Y	E	E	E	A	R	K	A	G	L	R	V	V	L	E	A	F	P	E	R	A	Y	L	R	S	G	Q	L	A	P	R	S	M	P	G	S	W	I	T	D	P	E	E	A	A	R	R	A	L
Template Known Secondary structure													.	.	.	.					T	T							T	T	S									T	T									T	T	B		B		T	T	S	S	B			T	T	S	T	T		B
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	Y	E	G	Y	C	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	V	L	E	G	K	V	E
Template Known Secondary structure						T	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions