Job Description P45541 Confidence 99.97% Date Thu Jan 5 12:03:00 GMT 2012 Rank 35 Aligned Residues 269 % Identity 13% Template d1xlma_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10														.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Query Sequence		K	T	G	M	F	T	C	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	L	P	I	E	H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	.	.	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation
Template Sequence		H	F	T	F	G	L	W	T	V	G	W	T	G	A	D	P	F	G	V	A	T	R	K	N	L	D	P	V	E	A	V	H	K	L	A	E	L	G	A	Y	G	I	T	F	H	D	N	D	L	I	P	F	D	A	T	E	A	E	R	E	K	I	L	G	D	F	N	Q	A	L	K	D	T	G	L	K	V	P	M	V
Template Known Secondary structure											T					B	T	T	B				S																T												S		T	T																					T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																											.	.	.	.
Query SS confidence											.	.	.	.																																											.	.	.	.
Query Sequence		T	P	E	T	N	G	Y	P	Y	.	.	.	.	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	.	.	.	.	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A
Query Conservation											.	.	.	.																																											.	.	.	.
Alig confidence											.	.	.	.																																											.	.	.	.
Template Conservation
Template Sequence		T	T	N	L	F	S	H	P	V	F	K	D	G	G	F	T	S	N	D	R	S	I	R	R	F	A	L	A	K	V	L	H	N	I	D	L	A	A	E	M	G	A	E	T	F	V	M	W	G	G	R	E	G	S	E	Y	D	G	S	K	D	L	A	A	A	L	D	R	M	R	E	G	V	D	T	A	A	G	Y	I
Template Known Secondary structure						S	S	S	G	G	G	T	T		S	T	T		S	S																						T		S							S	S	S			S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		139	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure						.	.														.	.																				.																					.	.																	.
Query SS confidence						.	.														.	.																				.																					.	.																	.
Query Sequence		E	N	I	G	.	.	M	D	L	I	L	E	P	L	T	P	Y	E	S	.	.	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	.	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M	S	.	.	Y	F	D	K	L	G	D	K	L	R	H	L	H	I	V	D	.
Query Conservation						.	.														.	.																				.																					.	.																	.
Alig confidence						.	.														.	.																				.																					.	.																	.
Template Conservation
Template Sequence		K	D	K	G	Y	N	L	R	I	A	L	E	P	K	P	N	E	P	R	G	D	I	F	L	P	T	V	G	H	G	L	A	F	I	E	Q	L	E	H	G	D	I	V	G	L	N	P	E	T	G	H	E	Q	M	A	G	L	N	F	T	H	G	I	A	Q	A	L	W	A	E	K	L	F	H	I	D	L	N	G	Q
Template Known Secondary structure					T		S									S		S	S	S	S			S	S		S									T	T		T	T	G	G	G						B						T	T	T													T	T		B							B
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K	M	P	L	R	E	L	M	R	D	I	I	.	.	.	.	.	.	.	E	R	G	Y	E	G	Y	C	T	V	E	L	V	T	M	Y	M	N	E	P	R	L	Y	A	R	Q	A	L	E	R	F	R	A	L	L
Query Conservation																												.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.																	.
Template Conservation																																																			.
Template Sequence		R	G	I	K	Y	E	Q	E	L	V	F	G	H	G	D	L	T	S	A	F	F	T	V	D	L	L	E	N	G	F	P	N	G	G	P	K	Y	T	G	P	R	H	F	D	Y	K	P	S	R	.	T	D	G	Y	D	G	V	W	D	S	A	K	A	N	M	S	M	Y
Template Known Secondary structure			S	S	S	S				B		T	T	S	S																	T	T							S										T	.	T	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions