Job Description P45541 Confidence 27.49% Date Thu Jan 5 12:03:00 GMT 2012 Rank 464 Aligned Residues 157 % Identity 6% Template d1vpya_ SCOP info TIM beta/alpha-barrel TM1631-like TM1631-like Resolution 2.52

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	G	M	F	T	C	G	H	Q	R	L	P	I	E	H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.										.								.	.	.	.																						.
Template Conservation											.	.	.	.	.	.	.										.								.	.	.	.																						.
Template Sequence		I	R	L	G	L	T	S	F	S	.	.	.	.	.	.	.	S	T	L	Y	E	Y	A	S	H	.	L	P	L	V	E	X	D	.	.	.	.	T	A	Y	Y	G	I	P	P	K	E	R	V	A	E	W	V	K	A	V	P	E	.	N	F	R	F	V	X	K	V	Y	S	G	I	S	C	Q	G	E	W	Q	T	Y
Template Known Secondary structure							S	T	T		.	.	.	.	.	.	.										.		S						.	.	.	.					S													T	S		T	.	T									T	T	T	T	T		S		G	G	G	T
Template Predicted Secondary structure											.	.	.	.	.	.	.										.								.	.	.	.																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10								.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	.	.	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V
Query Conservation																						.	.
Alig confidence																						.	.																	.	.	.	.	.	.	.	.																.	.															.
Template Conservation																																								.	.	.	.	.	.	.	.																.	.															.
Template Sequence		Y	A	S	E	E	E	X	I	T	A	F	L	E	S	X	A	P	L	I	E	S	K	K	L	F	A	F	L	V	Q	F	S	G	T	F	G	C	T	.	.	.	.	.	.	.	.	K	E	N	V	A	Y	L	Q	K	I	R	H	W	F	K	.	.	D	L	P	I	A	I	E	L	R	N	N	S	W	Y	.	Q	P
Template Known Secondary structure			S	S												T					T	T	T											T	T			S		.	.	.	.	.	.	.	.														T	T	.	.	T										G	G	G	G	.	S	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.																.	.															.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	V	K	Q	X	L	Q	F	X	K	E	N	Q	F	S	L	V	I	V	D	E	P
Template Known Secondary structure		T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions