Return to main results Retrieve Phyre Job Id

Job DescriptionP45541
Confidence91.29%DateThu Jan 5 12:03:00 GMT 2012
Rank80Aligned Residues125
% Identity7%Templated1rpxa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.. .......50.........60.........70.........
Predicted Secondary structure 




















.

















Query SS confidence 









































.




































Query Sequence  MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAP. DLKAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMML
Query Conservation 

 
  
       
   
      
   


          .             
   

                  
Alig confidence 









































.











...













........
Template Conservation    
 


 
 
   
   
      
   




 

 
      
   
  
  ...    
      
 
........
Template Sequence  IIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRP. . . ITDLPLDVHLMIVE. . . . . . . .
Template Known Secondary structure 
BGGGS
GGGTT


BSSSSS
B


GG...G

S
SSS........
Template Predicted Secondary structure 



















...










........
Template SS confidence 















































































   11........20.........30.........40.........50.........60..... ....70.........
 
   80.........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  GDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVC
Query Conservation                  
  
  

   
                       
  
   
   

 
 

           
Alig confidence  ............


























............




























Template Conservation  ............    
     



 
 
         ............           
    
        
   
Template Sequence  . . . . . . . . . . . . PDQRVPDFIKAGADIVSVHCEQSSTIH. . . . . . . . . . . . LHRTINQIKSLGAKAGVVLNPGTPLTAIE
Template Known Secondary structure  ............TT
S
STTT
S
............TTS
TT

GGGGT
Template Predicted Secondary structure  ............





............







Template SS confidence 















































































   80.........90.........100...... ...110.........120.........130.....
 
   160
Predicted Secondary structure 
Query SS confidence 
Query Sequence  N
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  Y
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   136
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions