Return to main results Retrieve Phyre Job Id

Job DescriptionP45541
Confidence53.11%DateThu Jan 5 12:03:00 GMT 2012
Rank302Aligned Residues219
% Identity13%Templated1rd5a_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution2.02

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10... ......20.........30.........40 .........50.........60......
Predicted Secondary structure 






.










...............







Query SS confidence 










.


























. . . . . . . . . . . . . . .

























Query Sequence  TGMFTCGHQRL. PIEHAFRDASELGYDGIEIWGGRPHAF. . . . . . . . . . . . . . . APDLKAGGIKQIKALAQTYQMPIIGY
Query Conservation   
  
      . 
   
      
   


        ...............               
   

     
Alig confidence 










.


























...............

























Template Conservation 
     
 
           
   


 



 




  

  
      

  
         
  

    




 
Template Sequence  IPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLL
Template Known Secondary structure  TTSS
TT
SS


S

TTS
TTT

GGG
SS
Template Predicted Secondary structure 


























Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80.........90.........100
 
   67..70.........80.........90.........100.........110.........120.........130.........140......
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  TPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLI
Query Conservation                               
  
  

   
                       
  
   
   

 
 
Alig confidence 





...................
























..............















Template Conservation   
 
  ...................    
     

   
    
    ..............           
   
Template Sequence  SYYKPI. . . . . . . . . . . . . . . . . . . MFRSLAKMKEAGVHGLIVPDLPYVA. . . . . . . . . . . . . . AHSLWSEAKNNNLELV
Template Known Secondary structure 

S...................S

TTT


TT

TTT..............TT

Template Predicted Secondary structure 




...................











..............



Template SS confidence 















































































   101..... ...110.........120.........130. ........140.......
 
   147..150.........160.........170.........180.........190.........200.........210.........220......
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  LEPLTPYESNVVCNANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIPGEGKM
Query Conservation 

                                
                     
   

 
           
 
 
Alig confidence 



.......







































.........



















Template Conservation    
 .......  
               
      
              ......... 
  

     







 
Template Sequence  LLTT. . . . . . . PAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVES. . . . . . . . . LIQEVKKVTNKPVAVGFGIS
Template Known Secondary structure 
.......TTS


S

SS

B
TTS
B
T.........
SS
S


Template Predicted Secondary structure 
.......
















.........






Template SS confidence 















































































   148.150. ........160.........170.........180.........190. ........200.........210.
 
   227..230.........240......... 250.........260.........270.
Predicted Secondary structure 





......





Query SS confidence 






















. . . . . .





















Query Sequence  PLRELMRDIIERGYEGYCTVELV. . . . . . TMYMNEPRLYARQALERFRALL
Query Conservation 
       
   

 
    
  ......             
   
   
Alig confidence 










.










......





















Template Conservation 
 
        .










                
 
    

 

Template Sequence  KPEHVKQIAQW. GADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKNAL
Template Known Secondary structure  ST.T
S
SSSS
Template Predicted Secondary structure 

.









Template SS confidence 


















































   212.......220.. .......230.........240.........250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions