Job Description P45541 Confidence 65.47% Date Thu Jan 5 12:03:00 GMT 2012 Rank 223 Aligned Residues 220 % Identity 15% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		3	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.															.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.
Predicted Secondary structure														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		T	G	M	F	T	C	G	H	Q	R	L	P	.	I	E	H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	.	.	Y	Q	M	P	I	I	G
Query Conservation														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	I	I	R	E	K	H	P	T	I	P	I	G	L
Template Known Secondary structure							T	T	S	S															T	T		S	S								S			T	T															T	T																		S	S	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	Y	A	N	L	V	F	N	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	I	A	P
Template Known Secondary structure										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			G	G	G											T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110																.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.															130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	E	P	L	T	P	Y	E	S	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M	S	Y	F	D	K	L	G	D	K	L	R	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K
Query Conservation
Alig confidence							.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.										.	.	.
Template Conservation							.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.										.	.	.
Template Sequence		I	F	I	C	P	.	.	.	.	.	.	.	P	N	A	D	D	D	L	L	R	Q	V	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	I	E	.	.	.	.	.	.	.	.	K	L	K	E	Y	H	A	A	P	.	.	.	A	L	Q	G	F	G	I
Template Known Secondary structure							.	.	.	.	.	.	.	T	T															S						S	S	S	S				S	S	S										.	.	.	.	.	.	.	.					T	T				.	.	.					S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		151	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		M	P	L	R	E	L	M	R	D	I	I	E	R	G	Y	E	G	Y	C	T	.	.	.	.	V	E	L	V	T	M	Y	M	N	E	P	R	L	Y	A	R	Q	A	L	E	R	F	R	A	L
Query Conservation																						.	.	.	.
Alig confidence													.									.	.	.	.
Template Conservation													.
Template Sequence		S	S	P	E	Q	V	S	A	A	V	R	.	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	K	N	L	A	S	P	K	Q	M	L	A	E	L	R	S	F	V	S	A	M
Template Known Secondary structure			S										.	T	T		S															T	T	T
Template Predicted Secondary structure													.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions