Job Description P45541 Confidence 24.76% Date Thu Jan 5 12:03:00 GMT 2012 Rank 491 Aligned Residues 170 % Identity 11% Template d1ny1a_ SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase Resolution 1.80

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		F	D	N	G	Y	E	N	G	Y	T	P	K	V	L	D	V	L	K	K	H	R	V	T	G	T	F	F	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	F	V	K	D	Q	P	Q	L	I	K	R	X	S	D	E	G	H	I	I	G	N	H	S	.	.	.	F	H	H	P	D	L	T	T	K	T
Template Known Secondary structure					S	S			S												T	T									.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T								.	.	.	S	S				G	G	G	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100														.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	.	A	P	Y	V	Q	A	E	P	V	M	S	Y	F	D	K
Query Conservation																																																																		.
Alig confidence																							.	.	.	.	.	.	.																																					.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		A	D	Q	I	Q	D	E	L	D	S	V	N	E	E	V	Y	K	I	T	G	K	.	.	.	.	.	.	.	Q	D	N	L	Y	L	R	P	P	R	G	V	F	S	E	Y	V	L	K	E	T	K	R	L	G	Y	Q	T	V	F	W	S	V	A	F	V	D	W	K	I	N	N	Q	K	G	K	K	Y	A	Y	D	H
Template Known Secondary structure																					S		.	.	.	.	.	.	.									G	G	G													T	T				B			S	B			S				G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		199	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		L	G	D	K	L	R	.	.	.	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K	M	P	L	R	E	L	M	R	D	I	I	E	R	G	Y	E
Query Conservation								.	.	.
Alig confidence								.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.
Template Sequence		X	I	K	Q	A	H	P	G	A	I	Y	L	L	H	T	V	S	R	D	N	A	E	A	L	.	.	.	.	.	.	.	.	.	D	D	A	I	T	D	L	K	K	Q	G	Y	T
Template Known Secondary structure					T			T	T							S		S	T	T						.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.										.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions