Return to main results Retrieve Phyre Job Id

Job DescriptionP45541
Confidence69.96%DateThu Jan 5 12:03:00 GMT 2012
Rank199Aligned Residues136
% Identity7%Templated1foba_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60..... ....70.........80. ......
Predicted Secondary structure 

















..













.......
Query SS confidence 
















































. .















. . . . . . .





Query Sequence  HAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIG. . YTPETNGYPYNMMLGD. . . . . . . EHMRRE
Query Conservation    
      
   


                       
   

    ..                .......      
Alig confidence 

















.





























..















.......





Template Conservation 
    

  
 
 


 
.
  
  
      
      
   

 



 



 



  
  
 

       
   
Template Sequence  ALETILADAGINSIRQRV. WVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQ
Template Known Secondary structure 
T

.
S

TT
TT
TT


SSS

BTTB
B

TTS
SS
Template Predicted Secondary structure 



.































Template SS confidence 















































































   31........40........ .50.........60.........70.........80.........90.........100.........
 
   88.90.........100..... ....110. ........120.........130.........140.. .......150...
Predicted Secondary structure 


..

...









....




Query SS confidence 

















. .





. . .






























. . . .










Query Sequence  SLDMIKLAMDMAKEMNAG. . YTLISA. . . AHAGYLTPPNVIWGRLAENLSELCEYAENIG. . . . MDLILEPLTPY
Query Conservation          
  
  

  .. 
    ...                   
  
   
   
....
 
 

     
Alig confidence 

















..





...






























....










Template Conservation     
   
    
  
     





   
  
             

 
   


         
 

     
Template Sequence  LYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGW
Template Known Secondary structure  TT


SSSSGGG
SSBTTTSTT
TS

SS

S
TT
Template Predicted Secondary structure 
































Template SS confidence 










































































   110.........120.........130.........140.........150.........160.........170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions