Return to main results Retrieve Phyre Job Id

Job DescriptionP45541
Confidence41.59%DateThu Jan 5 12:03:00 GMT 2012
Rank368Aligned Residues116
% Identity22%Templated1eh9a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.... .....50.........60.........70......
Predicted Secondary structure 













...............












...
Query SS confidence 





























. . . . . . . . . . . . . . .































. . .
Query Sequence  IEHAFRDASELGYDGIEIWGGRPHAFAPDL. . . . . . . . . . . . . . . KAGGIKQIKALAQTYQMPIIGYTPETNGYPYN. . .
Query Conservation 
   
      
   


            ...............           
   

               ...
Alig confidence 





























...............































...
Template Conservation 
   



  


  
 
 

         

   
   

   

  

  

  

  

 



 
 

 
      
Template Sequence  VIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEGNYM
Template Known Secondary structure  TT




B

SSS


STT


TT
B
STT

TT


S


SSS

Template Predicted Secondary structure 











































Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180.........190.........200
 
   77..80.........90.........100.........110.........120.........130...
Predicted Secondary structure  .....................

















Query SS confidence  . . . . . . . . . . . . . . . . . . . . .
























































Query Sequence  . . . . . . . . . . . . . . . . . . . . . MMLGDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSE
Query Conservation  .....................                   
  
  

   
                       
  
Alig confidence  .....................



















...

































Template Conservation                       

   
 
          

...   





 
                       
Template Sequence  VKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWI. . . KEYNVDGFRLDAVHAIIDTSPKHILEEIADVVHK
Template Known Secondary structure  S

S
SS


SSS



SSSTT...S



TTGGG



SSS
Template Predicted Secondary structure 























...










Template SS confidence 













































































   201........210.........220.........230.........240. ........250.........260.........270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions