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Job DescriptionP45541
Confidence100.00%DateThu Jan 5 12:03:00 GMT 2012
Rank15Aligned Residues272
% Identity14%Templatec3qxbB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKTGMF. TCGHQRLPIEH. . AFRDASELGYDGIEIWGGRPHAF. APDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPY.
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Template Sequence  XKLGVNLCFAVKRWLEPDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYN
Template Known Secondary structure 

GGGGTTTS
STT


TTTS
TTS
TT


TS
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   76...80.........90.........100.........110....... ..120.........130.........140.........150
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Query Sequence  NMMLGDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYL. . . . . TPPNVIWGRLAENLSELCEYAENIGMDLILEPL
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Template Sequence  HFLAPTLELQSLGYQHLKRAIDXTAAXEVPATGXPFGSYSAADALNPARREEIYAIARDXWIELAAYAKRQGLSXLYVEP
Template Known Secondary structure  BTT
SSTT
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BB

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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   151........160 .........170.........180..... ....190.........200.........210.........220.
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Query Sequence  TPYESNVVCN. . . ANDVLHALALVPSPRLFSMVDICAP. . . . . YVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIP.
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Template Sequence  VPLATEFPSSAADAARLXADLDGRTEIPVRLLVDWGHALFEPLFGPEADXDHWXDLCQPWIAAYHIQQTDGQLDRHWSFT
Template Known Secondary structure 
S
TTBSS
STTTSSS
T
GGG
SGGG
B

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B
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   222.......230.........240... ......250.........260 .........270..
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Query Sequence  GEGKMPLRELMRDIIERGYEGY. CTVELVTMYMNEPRLYA. . . RQALERFRALLP
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Template Sequence  QPGVVTPQRLQDFWDKYALTDQTFFAEILYPFEARDEDVLADXIASVKALKAASP
Template Known Secondary structure  S
SS

TT
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TTS
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   241........250.........260.........270.........280.........290.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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