Job Description P45541 Confidence 99.03% Date Thu Jan 5 12:03:00 GMT 2012 Rank 42 Aligned Residues 225 % Identity 13% Template c3p14C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans Resolution 2.51 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.				.
Predicted Secondary structure																													.	.	.	.	.																															.	.	.	.											.	.	.
Query SS confidence																													.	.	.	.	.																															.	.	.	.											.	.	.
Query Sequence		P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	.	.	.	.	.	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	.	.	.	.	A	K	E	M	N	A	G	Y	T	L	.	.	.	I
Query Conservation																													.	.	.	.	.																															.	.	.	.											.	.	.
Alig confidence																									.				.	.	.	.	.																															.	.	.	.											.	.	.
Template Conservation																									.
Template Sequence		D	Q	L	E	P	R	H	F	E	K	W	V	R	W	A	K	R	H	G	L	G	L	D	.	F	N	P	T	L	F	S	H	E	K	A	K	D	G	L	T	L	A	H	P	D	Q	A	I	R	Q	F	W	I	D	H	C	I	A	S	R	K	I	G	E	Y	F	G	K	E	L	E	T	P	C	L	T	N	I	W	I
Template Known Secondary structure		G	G			G	G	G	G											T					.						S	S	S	G	G	G	T	T	S		S	T	T		S	S																										T	S
Template Predicted Secondary structure																									.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	.	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		P	D	G	Y	K	D	T	P	S	D	R	L	T	P	R	K	R	L	K	E	S	L	D	Q	I	F	A	A	E	I	N	E	A	Y	N	L	D	A	V	E	S	K	L	F	G	I	G	S	E	S	Y	V	V	G	S	H	E	F	Y	L	S	Y	A	L	K	N	D	K	L	C	L	L	D	T	G	H	Y	H	P	T
Template Known Secondary structure						S	S			S		S															T		S				T	T	T									S		B	T	T	B		S			S	S												T	T							T	T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure													.	.																																										.	.
Query SS confidence													.	.																																										.	.
Query Sequence		A	E	P	V	M	S	Y	F	D	K	L	.	.	G	D	K	L	R	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K	M	P	L	R	E	L	M	R	D	I	I	E	R	G	Y	.	.	E	G	Y	C	T	V	E	L	V	T	M	Y	M	N	E	P	R	L	Y	A	R	Q	A	L
Query Conservation													.	.																																										.	.
Alig confidence													.	.					.																	.	.																			.	.											.
Template Conservation																			.																	.	.																															.
Template Sequence		E	T	V	S	N	K	I	S	A	M	L	L	F	H	D	K	L	.	A	L	H	V	S	R	P	V	R	W	D	S	D	H	V	V	.	.	T	F	D	D	E	L	R	E	I	A	L	E	I	V	R	N	D	A	L	D	R	V	L	I	G	L	D	F	F	D	.	A	S	I	N	R	I	A	A	W	T	I	G	T
Template Known Secondary structure				S												S			.						B		S	S	S				B			.	.		S														T	T		T	T	T										.	T	T	S
Template Predicted Secondary structure																			.																	.	.																															.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.
		265	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	F	R	A	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	V	I	K	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions