Return to main results Retrieve Phyre Job Id

Job DescriptionP45541
Confidence71.24%DateThu Jan 5 12:03:00 GMT 2012
Rank195Aligned Residues158
% Identity11%Templatec3ngjC_
PDB info PDB header:lyaseChain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  IEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKL
Query Conservation 
   
      
   


                       
   

                                 
Alig confidence 

















............






























.............





Template Conservation 
   
  
      



............ 
  
  
   
  
 
 
 





 
   .............   
  
Template Sequence  IRKLCSEAAEYKFASVCV. . . . . . . . . . . . NPTWVPLCAELLKGTGVKVCTVIGFPLGATP. . . . . . . . . . . . . SEVKAY
Template Known Secondary structure  T
S............
GGGTTTSS
STTT

S
.............
Template Predicted Secondary structure 



............













.............
Template SS confidence 















































































   24.....30.........40. ........50.........60.........70.. ......
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  AMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCNANDVLHALALVPSP
Query Conservation   
  
  

   
                       
  
   
   

 
 

                          
Alig confidence 

























...


























....



















Template Conservation 
   
   

 


 
 
   
  
 ...   
  

  
        






 .... 
  


  
   
  



Template Sequence  ETKVAVEQGAEEVDMVINIGMVKAKK. . . YDDVEKDVKAVVDASGKALTKVIIECC. . . . YLTNEEKVEVCKRCVAAGAE
Template Known Secondary structure  TT
S

TT
...TTS

GG....GS
T
S
Template Predicted Secondary structure 








...





....






Template SS confidence 















































































   7980.........90.........100.... .....110.........120.........130. ........140.........150.
 
   175....180.........190.........200....
Predicted Secondary structure 











Query SS confidence 





























Query Sequence  RLFSMVDICAPYVQAEPVMSYFDKLGDKLR
Query Conservation        
                     
 
Alig confidence 





























Template Conservation 






    


 
 
  
         
Template Sequence  YVKTSTGFGTHGATPEDVKLMKDTVGDKAL
Template Known Secondary structure 


SSSS



TTSS
Template Predicted Secondary structure 














Template SS confidence 





























   152.......160.........170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions