Job Description P45541 Confidence 100.00% Date Thu Jan 5 12:03:00 GMT 2012 Rank 22 Aligned Residues 251 % Identity 18% Template c3ngfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis Resolution 1.80 Å

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		2	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																																																															.	.
Query SS confidence							.																																																															.	.
Query Sequence		K	T	G	M	F	.	T	C	G	H	Q	R	L	P	I	E	H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	.	.	E	T	N	G	Y	P	Y	N	M	M
Query Conservation							.																																																															.	.
Alig confidence							.																																		.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		R	F	A	A	N	L	S	T	M	F	N	E	V	P	F	L	E	R	F	R	L	A	A	E	A	G	F	G	G	V	E	F	L	F	P	Y	D	F	D	.	.	.	.	.	.	.	.	.	A	D	V	I	A	R	E	L	K	Q	H	N	L	T	Q	V	L	F	N	M	P	P	G	D	W	A	A	G	E	R	G	M
Template Known Secondary structure							T	T	T	S		T	T	S												T	T		S					S			T	T	S		.	.	.	.	.	.	.	.	.											T	T											S		T	T	T	T			B
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	.	.	Y	E	S	N
Query Conservation																																																																												.	.
Alig confidence																																									.																																			.	.
Template Conservation																																									.
Template Sequence		A	A	I	S	G	R	E	Q	E	F	R	D	N	V	D	I	A	L	H	Y	A	L	A	L	D	C	R	T	L	H	A	M	S	G	I	T	E	G	L	.	D	R	K	A	C	E	E	T	F	I	E	N	F	R	Y	A	A	D	K	L	A	P	H	G	I	T	V	L	V	E	P	L	N	T	R	N	M	P	G	Y
Template Known Secondary structure		T	T		T	T																			T	T								B		B		T	T	S	.																					G	G	G	T										T	T	T	S	T	T	B
Template Predicted Secondary structure																																									.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M	S	Y	F	D	K	L	G	D	K	L	R	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K	M	P	L	R	E	L	M	R	D	I	I
Query Conservation
Alig confidence																																																											.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		F	I	V	H	Q	L	E	A	V	G	L	V	K	R	V	N	R	P	N	V	A	V	Q	L	D	L	Y	H	A	Q	I	M	D	G	D	L	T	R	L	I	E	K	M	N	G	A	F	S	H	V	Q	I	A	S	V	P	D	.	.	.	.	R	H	E	P	D	E	G	E	L	N	Y	P	Y	L	F	S	V	L	E
Template Known Secondary structure		S																	T	T														T										T	T	T	S									T	T	T	.	.	.	.				T	T	S	S	S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	Y	E	G	Y	C	T	V	E	L	V	T	M	Y	M	N	E	P	R	L	Y	A	R	Q	A	L	E	R	F	R	A	L	L	P
Query Conservation
Alig confidence														.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		S	V	G	Y	R	G	W	V	G	C	E	Y	.	.	.	.	.	.	N	P	R	G	K	T	E	S	G	L	A	W	F	A	P	Y	R	D
Template Known Secondary structure			T	T			S							.	.	.	.	.	.			S	S	S	G	G	G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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