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Job DescriptionP45541
Confidence60.96%DateThu Jan 5 12:03:00 GMT 2012
Rank250Aligned Residues134
% Identity8%Templatec3n2xB_
PDB info PDB header:lyaseChain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90...
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Query Sequence  YDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIK. . . . . . . . . . . . .
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Template Sequence  FTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFL. . . . GSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT
Template Known Secondary structure  S


B



B
TTS
B
TT
S
S....STTTTGGGS
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   14.....20.........30.........40.........50.... .....60.........70.........80.........
 
   94.....100.........110.........120.........130.........140.........150.........160....
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Query Sequence  . . . . . . . . . LAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCNANDV
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Template Sequence  GGTNARETIELSQHAQQAGADGIVVINPYYWKVSE. . . . . ANLIRYFEQVAD. . . SVTLPVMLYNFPAL. TGQDLTPALV
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SS
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S

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   90.........100.........110.........120.... .....130...... ...140.........150 .........160
 
   165....170...
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Query Sequence  LHALALVPS
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Template Sequence  KTLADSRSN
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TT
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   161........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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