Job Description P45541 Confidence 77.90% Date Thu Jan 5 12:03:00 GMT 2012 Rank 159 Aligned Residues 232 % Identity 11% Template c3k2gA_ PDB info PDB header:resiniferatoxin binding protein Chain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		F	R	D	A	S	E	L	G	Y	D	.	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D
Query Conservation												.
Alig confidence												.													.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.
Template Sequence		V	K	Q	F	A	A	V	G	G	R	S	I	V	D	P	T	C	R	G	I	G	R	D	.	.	.	.	.	.	.	.	P	V	K	L	R	R	I	S	A	E	T	G	V	Q	V	V	X	G	A	G	Y	Y	L	A	S	S	X	P	E	T	A	A	R	L	S	A	D	D	I	A	D	E	I	V	A	E	A	L	E
Template Known Secondary structure								T	T										B	T	T	T			.	.	.	.	.	.	.	.																				S	B			G	G	G			G	G	G	G	T																T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.									.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F
Query Conservation
Alig confidence																											.	.	.	.	.																							.	.	.	.	.
Template Conservation																											.	.	.	.	.																							.	.	.	.	.
Template Sequence		G	T	D	G	T	D	A	R	I	G	L	I	G	E	I	G	V	S	S	D	F	T	A	E	E	.	.	.	.	.	E	K	S	L	R	G	A	A	R	A	Q	V	R	T	G	L	P	L	X	V	H	L	.	.	.	.	.	P	G	W	F	R	L	A	H	R	V	L	D	L	V	E	E	E	G	A	D	L	R	H
Template Known Secondary structure			B	T	T	B	S				S	S								T	T						.	.	.	.	.																							.	.	.	.	.		T	T	S													T	T			G	G	G
Template Predicted Secondary structure																											.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M	S	Y	F	D	K	L	G	D	K	L	R	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K	M	P	L	R	E	L	M	R	D	I	I	E	R	G	Y	E	G	Y	C	T	V	E	L	V	T	M	Y	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																												.																																	.	.	.	.	.
Template Conservation																																												.
Template Sequence		T	V	L	C	H	X	N	P	S	H	X	D	P	V	Y	Q	A	T	L	A	Q	R	G	A	F	L	E	F	D	X	I	G	X	D	F	F	Y	A	D	Q	G	V	.	Q	C	P	S	D	D	E	V	A	R	A	I	L	G	L	A	D	H	G	Y	L	D	R	I	L	L	S	H	D	V	F	V	K	X	X	L	T
Template Known Secondary structure								G	G	G	T	T												T								T	T						T	T	T	T		.																		T	T		G	G	G									S	G	G	G	S	G
Template Predicted Secondary structure																																												.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
					253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	M	N	E	P	R	L	Y	A	R	Q	A	L	E	R	F	R	A
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		R	Y	G	G	N	G	Y	A	F	V	T	K	H	F	L	P	R	L	R	R
Template Known Secondary structure		G	G	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions