Job Description P45541 Confidence 30.04% Date Thu Jan 5 12:03:00 GMT 2012 Rank 441 Aligned Residues 171 % Identity 12% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	.	.	.	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V	C
Query Conservation																																																														.	.	.
Alig confidence																																			.																											.	.	.								.	.	.	.	.	.	.	.
Template Conservation																																			.																																					.	.	.	.	.	.	.	.
Template Sequence		A	L	L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	.	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	.	.	.	.	.	.	.	.	T	K
Template Known Secondary structure																					T	T		S							T	T	G	G	.	G	S									T											S		S			T	T									.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																																			.																																					.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.									.	250
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M	S	Y	F	D	K	L	G	D	K	L	R	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K	M	P	L	R	E	L	M	R	D	I	I	E	R	G
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Sequence		G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	.	.	.	.	.	.	.	.	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	.	.	.	.	.	.	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G
Template Known Secondary structure		T	T	T	T	T						T	T	S		S					.	.	.	.	.	.	.	.		T	T	S										T	T	T	S				.	.	.	.	.	.			B		G	G	G	G	G	S														T	T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.									270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		Y	E	G	Y	C	T	V	E	L	V	.	T	M	Y	M	N	E	P	R	L	Y	A	R	Q	A	L	E	R	F	R	A	L	L	P	E	D	E	R
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S	E	Q	Y	H	R
Template Known Secondary structure		T	S	S				B		B	S	S				T	T	S																	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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