Job Description P45541 Confidence 24.65% Date Thu Jan 5 12:03:00 GMT 2012 Rank 494 Aligned Residues 150 % Identity 13% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		14	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		P	I	E	H	A	F	R	D	A	S	E	.	.	.	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D
Query Conservation													.	.	.
Alig confidence													.	.	.														.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	E	I	V	I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I	E	.	.	.	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	N	V	P	L	S	L	D	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	N	V	D	L	T	E	R	A	L	R
Template Known Secondary structure																T	T		S							S	S	G	.	.	.	G	G	S																T		S						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.				.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390													.	.	.	.	.	.	.	.	.	400	.	.
																		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	.	.	D	L	I	L	E	P	L	T	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.																				.	.
Template Conservation																																															.	.	.	.	.
Template Sequence		A	Y	P	G	R	S	L	F	N	S	A	K	V	D	E	E	E	L	E	M	K	I	N	L	L	K	K	Y	G	G	T	L	I	V	L	L	M	G	K	D	V	P	K	S	F	.	.	.	.	.	E	E	R	K	E	Y	F	E	K	A	L	K	I	L	E	R	H	D	F	S	D	R	V	I	F	D	P	G	V	L
Template Known Secondary structure				S	S									S																							S		S	S	S				S		.	.	.	.	.																	T	T		T	T	S
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.						.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	S	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		P	.	L	G	A	E	G	K	P	V	E	V	L	K	T	I	E	F	I	S	S	K	G	F	N	T	T	V	G	L	S	N
Template Known Secondary structure			.	G	G	G	T																T	T			B			B	G	G	G
Template Predicted Secondary structure			.
Template SS confidence
		478		.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions