Job Description P45541 Confidence 96.86% Date Thu Jan 5 12:03:00 GMT 2012 Rank 47 Aligned Residues 207 % Identity 17% Template c3bleA_ PDB info PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		R	L	P	I	E	H	A	F	R	.	.	.	.	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	S	T	S	E	K	L	N	I	A	K	F	L	L	Q	K	L	N	V	D	R	V	E	I	A	S	A	R	V	S	K	G	E	L	E	T	V	Q	K	I	M	E	W	A	A	T	E	Q	L	T	E	R	I	E	I	L	G	F	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		T	T			S							T	T	S		T	T															T	T		G	G	G							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																				.	.																																		.	.
Query SS confidence																																				.	.																																		.	.
Query Sequence		S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	.	.	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	.	.	S	N	V	V	C	N	A	N	D
Query Conservation																																				.	.																																		.	.
Alig confidence		.	.	.	.																															.	.																																		.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	G	N	K	T	V	D	W	I	K	D	S	G	A	K	V	L	N	L	L	T	K	G	S	L	H	H	L	E	K	Q	L	G	K	T	P	K	E	F	F	T	D	V	S	F	V	I	E	Y	A	I	K	S	G	L	K	I	N	V	Y	L	E	D	W	S	N	G	F	R	N	S	P	D	Y	V	K	S
Template Known Secondary structure		.	.	.	.	T	T										T											S								T																					T	T									T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																									.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																									.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	.	.	V	Q	A	E	P	V	M	S	Y	F	D	K	L	G	D	K	L	R	H	L	H	I	V	D	S	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	T	H	Y	I	P	G	E	.	.
Query Conservation																									.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence																									.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		L	V	E	H	L	S	K	E	H	I	E	R	I	F	L	P	D	T	L	G	V	L	S	P	E	E	T	F	Q	G	V	D	S	L	I	Q	K	Y	P	D	I	H	F	E	F	H	G	H	N	D	Y	D	L	S	V	A	N	S	L	Q	A	I	R	A	G	V	K	G	L	H	A	S	I	N	G	L	G	E	R	A
Template Known Secondary structure								T	S			S							T	T																				T	T	S							B		T	T	S												T	T		S					B	G	G	G		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		G	K	M	P	L	R	E	L	M	R	D	I	I	E	.	R	G	Y	E
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		G	N	T	P	L	E	A	L	V	T	T	I	H	D	K	S	N	S	K
Template Known Secondary structure			B		B												S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions