Job Description P45541 Confidence 99.97% Date Thu Jan 5 12:03:00 GMT 2012 Rank 34 Aligned Residues 254 % Identity 11% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

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		19	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		F	R	D	A	S	E	L	.	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D
Query Conservation									.
Alig confidence									.										.																																		.	.	.
Template Conservation																			.																																		.	.	.
Template Sequence		L	E	E	I	K	A	I	P	G	M	Q	G	I	V	T	A	V	.	Y	D	V	P	V	G	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	L	E	I	T	V	I	E	S	.	.	.	I	P	V	H	E	D	I	K	Q	G	K	P	N	R	D	A	L	I	E	N	Y	K	T	S	I	R
Template Known Secondary structure							T	S	T	T									.		S	S		T	T	S																	T	T									.	.	.										T		T	T
Template Predicted Secondary structure																			.																																		.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																																							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F	I	K	A	I	L	P	T	A	E
Template Known Secondary structure							T										S	S		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																				.	.	.	.	.																																		.											.	.
Query SS confidence																				.	.	.	.	.																																		.											.	.
Query Sequence		N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	.	.	.	.	.	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	.	P	V	M	S	Y	F	D	K	L	G	.	.	D	K	L	R	H	L	H	I	V	D	S
Query Conservation																				.	.	.	.	.																																		.											.	.
Alig confidence																				.	.	.	.	.																																		.											.	.
Template Conservation
Template Sequence		E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F	G	L	P	R	I	I	T	G	Q	E	A	V	E	R	F	L	N	L	Y	D	S	E	H	N	G	I	T	M	C	V	G	S	Y	A	S	D	P	K	N	D	V	L	A	M	T	E	Y	A	L	K	R	N	R	I	N	F	M	H	T	R	N	V
Template Known Secondary structure				T									S	S	S	S			T	T							S									T	T	S		S	T	T											T	T	S	T	T														T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		212	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence		D	G	A	S	D	T	H	Y	.	.	.	.	I	P	G	E	G	K	M	P	L	R	E	L	M	R	D	I	I	E	R	G	Y	E	G	Y	C	T	V	E	L	V	T	M	Y	M	N	E	.	.	.	.	.	.	.	P	R	L	Y	A	R	Q	A	L	E	R	F	R	A	L	L	P	E	D	E	R
Query Conservation										.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence										.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	G	A	W	G	F	Q	E	T	A	H	L	S	Q	A	G	D	I	D	M	N	A	V	V	K	L	L	V	D	Y	D	W	Q	G	S	L	R	P	D	H	G	R	R	I	W	G	D	Q	T	K	T	P	G	Y	G	L	Y	D	R	A	L	G	A	T	Y	F	N	G	L	Y	E	A	N	M	R
Template Known Secondary structure					T	T							S	S	G	G	G	S	S													T	T												B		T	T					S	T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions