Job Description P45541 Confidence 80.86% Date Thu Jan 5 12:03:00 GMT 2012 Rank 145 Aligned Residues 200 % Identity 16% Template c2yswB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of the 3-dehydroquinate dehydratase from aquifex2 aeolicus vf5 Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	G	M	F	T	C	G	H	Q	R	L	P	I	E	H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G
Query Conservation
Alig confidence											.	.	.																									.	.	.	.																								.	.
Template Conservation											.	.	.																									.	.	.	.																								.	.
Template Sequence		M	L	I	A	V	P	L	D	D	.	.	.	T	N	F	S	E	N	L	K	K	A	K	E	K	G	A	D	I	V	E	L	R	V	D	Q	.	.	.	.	F	S	D	T	S	L	N	Y	V	K	E	K	L	E	E	V	H	S	Q	G	L	K	T	.	.	I	L	T	I	R	S	P	E	E	G	G	R	E	V	K
Template Known Secondary structure										S	.	.	.	T	T											T	T		S						G	G	G	.	.	.	.		S																	T	T				.	.							G	G	G	T					T
Template Predicted Secondary structure											.	.	.																									.	.	.	.																								.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.	.	.	.															90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	H	M	R	R	E	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																												.	.	.	.	.
Template Conservation																																												.	.																												.	.	.	.	.
Template Sequence		N	R	E	E	L	F	E	E	L	S	P	L	S	D	Y	T	D	I	E	L	S	S	R	G	L	L	V	K	L	Y	N	I	T	K	E	A	G	K	K	L	I	I	.	.	S	Y	H	N	F	E	L	T	P	P	N	W	I	I	R	E	V	L	R	E	G	Y	R	Y	G	G	I	.	.	.	.	.	P	K	I	A
Template Known Secondary structure		T									G	G	G	S	S						T	T															T	T						.	.					S	S																		T	T	S		.	.	.	.	.
Template Predicted Secondary structure																																												.	.																												.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		L	E	P	L	T	P	Y	E	S	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M	S	Y	F	.	D	K	L	G	D	K	L	R	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K
Query Conservation																																																				.
Alig confidence							.	.	.	.	.	.																									.	.	.	.	.	.										.															.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.																									.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		V	K	A	N	S	.	.	.	.	.	.	Y	E	D	V	A	R	L	L	C	I	S	R	Q	V	E	G	E	K	I	L	I	S	M	G	.	.	.	.	.	.	D	Y	G	K	I	S	R	L	A	G	Y	V	F	G	S	V	I	T	Y	C	S	L	E	K	.	.	.	.	.	.	.	.	.	A	F	A	P	G	Q
Template Known Secondary structure					S	S	.	.	.	.	.	.												T	T	S		S		B						T	.	.	.	.	.	.	T	G	G	G	G					G	G	G	G	T	B						B	S	S	S	.	.	.	.	.	.	.	.	.			S	T	T
Template Predicted Secondary structure							.	.	.	.	.	.																									.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.										.	.	200	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	L	R	E	L	M	R	D	I	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	L	E	E	M	V	E	L	R	K	K
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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