Job Description P45541 Confidence 100.00% Date Thu Jan 5 12:03:00 GMT 2012 Rank 23 Aligned Residues 263 % Identity 15% Template c2x7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		M	K	T	G	M	F	T	C	G	H	Q	R	L	P	I	E	H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	.	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L
Query Conservation																																										.
Alig confidence													.	.																												.																																	.
Template Conservation													.	.																																																													.
Template Sequence		I	K	I	G	A	H	M	P	I	S	K	.	.	G	F	D	R	V	P	Q	D	T	V	N	I	G	G	N	S	F	Q	I	F	P	H	N	A	R	S	W	S	A	K	L	P	S	D	E	A	A	T	K	F	K	R	E	M	K	K	H	G	I	D	W	E	N	A	F	C	H	S	G	Y	.	L	I	N	L	A	S
Template Known Secondary structure											T	T	.	.		G	G	G								T	T		S						S				S	S	S																					T			G	G	G							T	.	T			T	T
Template Predicted Secondary structure													.	.																																																													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V	C
Query Conservation
Alig confidence																																								.																					.	.
Template Conservation																																								.																					.	.
Template Sequence		P	K	D	D	I	W	Q	K	S	V	E	L	L	K	K	E	V	E	I	C	R	K	L	G	I	R	Y	L	N	I	H	P	G	S	H	L	G	T	.	G	E	E	E	G	I	D	R	I	V	R	G	L	N	E	V	L	N	N	T	.	.	E	G	V	V	I	L	L	E	N	V	S	Q	K	G	G	N	I	G	Y
Template Known Secondary structure		S	S																						T												T	T	S	.																		T	T		.	.		S												T	T				S
Template Predicted Secondary structure																																								.																					.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure															.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.
Query SS confidence															.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.
Query Sequence		N	A	N	D	V	L	H	A	L	A	L	V	P	.	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M	.	.	.	.	.	.	S	Y	F	D	K	L	G	.	.	.	.	.	D	K	L	R	H	L	H	I	V	D	S	D	G	.	.	.	.	A	S	D	T	H	Y	I	P	G	E
Query Conservation															.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.
Alig confidence															.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		K	L	E	Q	L	K	K	I	R	D	L	V	D	Q	R	D	R	V	A	I	T	Y	D	T	C	H	G	F	D	S	G	Y	D	I	T	K	K	E	G	V	E	A	L	L	N	E	I	E	S	L	F	G	L	E	R	L	K	M	I	H	L	N	D	S	K	Y	P	L	G	A	A	K	D	R	H	E	R	I	G	S
Template Known Secondary structure		S												S		G	G	G													T	T			T	T	S															T		G	G	G										S	S		T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		G	K	M	P	L	R	E	L	M	R	D	I	I	E	R	G	Y	E	G	.	Y	C	T	V	E	L	V	T	M	Y	M	N	E	P	R	L	Y	A	R	Q	A	L	E	R	F	R	A	L
Query Conservation																					.
Alig confidence																					.									.
Template Conservation																														.
Template Sequence		G	F	I	G	E	E	G	F	A	V	F	F	S	F	K	E	I	Q	E	V	P	W	I	L	E	T	P	G	.	G	N	E	E	H	A	E	D	I	K	K	V	F	E	I	I	E	K	F
Template Known Secondary structure		S	S	S										T						T	S							S	S	.																			T
Template Predicted Secondary structure																														.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions