Job Description P45541 Confidence 89.35% Date Thu Jan 5 12:03:00 GMT 2012 Rank 95 Aligned Residues 154 % Identity 10% Template c2qgqF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:protein tm_1862; PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77 Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																		.	.	.																				.
Query SS confidence																		.	.	.																				.
Query Sequence		H	Q	R	L	P	I	E	H	A	F	R	D	A	S	E	L	.	.	.	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	.	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R
Query Conservation																		.	.	.																				.
Alig confidence																		.	.	.																				.																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		L	R	S	R	S	I	E	D	I	T	R	E	V	E	D	L	L	K	E	G	K	K	E	I	I	L	V	A	Q	D	T	T	S	Y	G	I	D	L	Y	R	K	Q	A	L	P	D	L	L	R	R	L	N	S	L	N	G	E	F	W	I	R	V	X	Y	L	H	P	D	H	L	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				B																T	T									S		G	G	G	T	T	T	T	T	T	S	S												T	S	S	S	S										G	G	G			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																				.	.																																							.	.
Query SS confidence																				.	.																																							.	.
Query Sequence		R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	.	.	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	.	.	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V	C	N	A
Query Conservation																				.	.																																							.	.
Alig confidence		.	.	.	.	.	.	.												.	.																																							.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	E	I	I	S	A	X	L	E	L	D	K	V	V	K	Y	F	D	V	P	V	Q	H	G	S	D	K	I	L	K	L	X	G	R	T	K	S	S	E	E	L	K	K	X	L	S	S	I	R	E	R	F	P	D	A	V	L	R	T	S	I	I	V	G	F	P	G	E	T	E	E	D	F
Template Known Secondary structure		.	.	.	.	.	.	.											T	T	B		S							B		S									T			S																	T	T										S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	L	K	Q	F	V	E	E	I	Q	F	D	K	L	G	A	F
Template Known Secondary structure														S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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